Non-Coding RNA Search

Ss1.1-rebs27c_j9.5

Sequence:


               
               TCGCAGCTGCTTCTGGGGAAGGTGAAGTGCAGCTGTTTGATCTCCAAAAGAGCTCCCAGA
AACCCACGGTTTCGGTCAAGCAAACCCAGGATGAAAGGCCCGTCTACTGTCTTGAATTTA
ATTGCCAGCAGACTCAGCTCCTGGCTGCGGGCGATGCCCAGGGCACGGTGAAGGTGTGGC
GGCTGAGCACCGAGTTCACGGAACAAGGACCCCGGGAAAGAGAGGACCTGGACCAGCTGG
CAGCAGAGGTGGCCACCTGAGGGCGACAGAGCTCCGCGGGGCCGTGGTGAGGCGGTAGTG
GTGGGTGAGGGGGCTGCACCTGTGCTGTTTCTGATGGGAGCCGAATGAAGACGAGAAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGCAGCTGCTTCTGGGGAAGGTGAAGTGCAGCTGTTTGATCTCCAAAAGAGCTCCCAGA
AACCCACGGTTTCGGTCAAGCAAACCCAGGATGAAAGGCCCGTCTACTGTCTTGAATTTA
ATTGCCAGCAGACTCAGCTCCTGGCTGCGGGCGATGCCCAGGGCACGGTGAAGGTGTGGC
GGCTGAGCACCGAGTTCACGGAACAAGGACCCCGGGAAAGAGAGGACCTGGACCAGCTGG
CAGCAGAGGTGGCCACCTGAGGGCGACAGAGCTCCGCGGGGCCGTGGTGAGGCGGTAGTG
GTGGGTGAGGGGGCTGCACCTGTGCTGTTTCTGATGGGAGCCGAATGAAGACGAGAAGCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               18-262, gnl|bosTau2|chr11 (78449951-78449707)
               

               
               18-262, gnl|Hg17|chr9 (128475819-128475575)
               

               
               18-262, gnl|Mm7|chr2 (30039287-30039043)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-262, gnl|bosTau2|chr11 (78449951-78449707)
               

               
               18-262, gnl|Hg17|chr9 (128475819-128475575)
               

               
               18-262, gnl|Mm7|chr2 (30039287-30039043)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fce (0.271592)
               

               
               kid (0.129735)
               

               
               ebs (0.118301)
               

               
               cty (0.10408)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               kid (0.129735)
               

               
               ebs (0.118301)
               

               
               cty (0.10408)

	18-262, gnl\|bosTau2\|chr11 (78449951-78449707)
	18-262, gnl\|Hg17\|chr9 (128475819-128475575)
	18-262, gnl\|Mm7\|chr2 (30039287-30039043)