Ss1.1-rebs29c_h8.5
|
CACCTCTTCTTGGCCACCGCCTGCCAGGACACTGACGACTGGGCGGACTGGGCTCGGCTG
CGCGCGCCATGGCCCGGGGCCTGCGCGGCCTCCCGCGGCGCGGCCTCTGGCTGCTGCTGG
TGAATCACCTCTTCTTGGCCACCGCCTGCCAGGACACTGACCACGCCGCCCTCCTCCGGA
AGTACTGCCTCCCCCAGTTCCAGGTGGACATGGAGGCCATCGGGAAGGCGCTGTGGTGCG
ACTGGGACAAGACCATCGGGAGCTATAAAGACCTCTCAGACTGCACCAGGCTCGTGGCGC
AAAGGCTGGACTGCTTCTGGCCCAACGCGGCGGTGGACAAGTTCTTCCTGGGAGTCCACC
AGCAGTACTTCAGAAACTGCCCCGTCTCCGGCAGGGCCTTGCAGGACCCGCCCAGCAGCG
TCCTCTGCCCCTTCATCGTCGTCCCCATCCTGGCGACCCTGCTCATGACCGCCCTGGTGG
TCTGGAGGAGCAAGCGCCCCGAGGGCATCGTGTAGCCGCTCCCGAAAGCTGTGGGGCGCT
AACGGCAGAGCGGCGCCCCAGGCCCCTCTTCCACCCAAGAGAAGCTATAACCGCAGGATT
TGCGAGTGGTCCTGGCACAGGCATTGACCCGGAAGCCACCCTTGGAAGGGCTGCCCAGGC
GCCGGGAGCGGGCACAGCGACAGTCTTCCTGCGGGGCGGGCTAAGCCGGATCCCAATTGT
TTAGAAACCACCCCCAGTTCCGTCCAACCTCTTGCCAGGCTGTGCATAAGGAGTCTGCAA
TTAAAAGATGTCCCTGAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CACCTCTTCTTGGCCACCGCCTGCCAGGACACTGACGACTGGGCGGACTGGGCTCGGCTG
CGCGCGCCATGGCCCGGGGCCTGCGCGGCCTCCCGCGGCGCGGCCTCTGGCTGCTGCTGG
TGAATCACCTCTTCTTGGCCACCGCCTGCCAGGACACTGACCACGCCGCCCTCCTCCGGA
AGTACTGCCTCCCCCAGTTCCAGGTGGACATGGAGGCCATCGGGAAGGCGCTGTGGTGCG
ACTGGGACAAGACCATCGGGAGCTATAAAGACCTCTCAGACTGCACCAGGCTCGTGGCGC
AAAGGCTGGACTGCTTCTGGCCCAACGCGGCGGTGGACAAGTTCTTCCTGGGAGTCCACC
AGCAGTACTTCAGAAACTGCCCCGTCTCCGGCAGGGCCTTGCAGGACCCGCCCAGCAGCG
TCCTCTGCCCCTTCATCGTCGTCCCCATCCTGGCGACCCTGCTCATGACCGCCCTGGTGG
TCTGGAGGAGCAAGCGCCCCGAGGGCATCGTGTAGCCGCTCCCGAAAGCTGTGGGGCGCT
AACGGCAGAGCGGCGCCCCAGGCCCCTCTTCCACCCAAGAGAAGCTATAACCGCAGGATT
TGCGAGTGGTCCTGGCACAGGCATTGACCCGGAAGCCACCCTTGGAAGGGCTGCCCAGGC
GCCGGGAGCGGGCACAGCGACAGTCTTCCTGCGGGGCGGGCTAAGCCGGATCCCAATTGT
TTAGAAACCACCCCCAGTTCCGTCCAACCTCTTGCCAGGCTGTGCATAAGGAGTCTGCAA
TTAAAAGATGTCCCTGAAAAAAAAAAAAAAAAAAAA
|
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252-515, gnl|bosTau2|chr3 (84364559-84364822) |
|
252-515, gnl|canFam2|chr25 (51488200-51488467) |
|
252-515, gnl|danRer3|chr9 (27498730-27498465) |
|
252-515, gnl|echTel1|scaffold_182397 (2769-3036) |
|
252-515, gnl|fr1|chrUn (49055745-49055482) |
|
252-515, gnl|galGal2|chr7 (4569687-4569419) |
|
252-515, gnl|hg17|chr2 (238602160-238602427) |
|
252-515, gnl|Hg17|chr2 (238602162-238602424) |
|
252-515, gnl|loxAfr1|scaffold_147649 (1342-1075) |
|
252-515, gnl|mm7|chr1 (91130541-91130808) |
|
252-515, gnl|Mm7|chr1 (91130543-91130806) |
|
252-515, gnl|monDom2|scaffold_184 (802187-801920) |
|
252-515, gnl|oryCun1|scaffold_132355 (4889-4622) |
|
252-515, gnl|panTro1|chr13 (129545719-129545986) |
|
252-515, gnl|rn3|chr9 (90654220-90654487) |
|
252-515, gnl|tetNig1|chr2 (15840747-15841006) |
|
252-515, gnl|xenTro1|scaffold_49 (1292370-1292100) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
252-515, gnl|bosTau2|chr3 (84364559-84364822) |
|
252-515, gnl|canFam2|chr25 (51488200-51488467) |
|
252-515, gnl|danRer3|chr9 (27498730-27498465) |
|
252-515, gnl|echTel1|scaffold_182397 (2769-3036) |
|
252-515, gnl|fr1|chrUn (49055745-49055482) |
|
252-515, gnl|galGal2|chr7 (4569687-4569419) |
|
252-515, gnl|hg17|chr2 (238602160-238602427) |
|
252-515, gnl|Hg17|chr2 (238602162-238602424) |
|
252-515, gnl|loxAfr1|scaffold_147649 (1342-1075) |
|
252-515, gnl|mm7|chr1 (91130541-91130808) |
|
252-515, gnl|Mm7|chr1 (91130543-91130806) |
|
252-515, gnl|monDom2|scaffold_184 (802187-801920) |
|
252-515, gnl|oryCun1|scaffold_132355 (4889-4622) |
|
252-515, gnl|panTro1|chr13 (129545719-129545986) |
|
252-515, gnl|rn3|chr9 (90654220-90654487) |
|
252-515, gnl|tetNig1|chr2 (15840747-15841006) |
|
252-515, gnl|xenTro1|scaffold_49 (1292370-1292100) |
|
nms (1.06929) |
|
ton (0.702001) |
|
fcc (0.39557) |
|
cli (0.305623) |
|
nca (0.273748) |
|
ese (0.253004) |
|
cly (0.241284) |
|
mas (0.210305) |
|
col (0.195008) |
|
nlu (0.191681) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
lnt (0.142308) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
cov (0.132153) |
|
ebs (0.118301) |
|
med (0.116252) |
|
jca (0.11396) |
|
nms (1.06929) |
|
ton (0.702001) |
|
fcc (0.39557) |
|
cli (0.305623) |
|
nca (0.273748) |
|
ese (0.253004) |
|
cly (0.241284) |
|
mas (0.210305) |
|
col (0.195008) |
|
nlu (0.191681) |
|
fhi (0.169578) |
|
nje (0.16592) |
|
lnt (0.142308) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
cov (0.132153) |
|
ebs (0.118301) |
|
med (0.116252) |
|
jca (0.11396) |
