Non-Coding RNA Search

Ss1.1-rebs30c_a9.5

Sequence:


               
               TTTTCCTTTTCTGCCAACTTTGTTTTCCAGTGTTTACAAGTTGACCACTATTTGACTTCG
TTTCATTGTCCACGTAAAATAGCTGCCTTTTGTTTTCTAAGTTACAAGTACTGCCTAGAG
GTGTAGGATCCTCACAGGATAACTTTACAAAATATGATTGTTTACAGTGGCTCTTCCCCC
CCCTTCCCCCCCAGTGAGTTCTGATTTTTAAATTTTTGCCTGTGTGCAGCTCAGGTGAAA
ATCCATCTCGTTCTGGAATGGTTTTGCTTTCGGGTTTTTGGTTCTTTTGTTGTTGTCGTT
TGCTTGGGGGTGAGACCACTTCCGAGAAGCCACCACCTGCCTGTATCTGTGAAAAGGATC
TGCTCCCCAGGTGTCCCCGTCCTTTCTTTGGAAGGACTCTTAGGCTTTGTTGAATGAAGC
AGAGAAGATTGTATAGCTGGGGCTGGTCTTGGTGAACACACATTTTTTTACCCCAAACAT
CCCCTTTTTGTAGAAAGCCAAATAAAATATATACATACAATTTCCTTTTGAGCCCAGAAT
CTAGATTTGAGCGGAAGAGCATGTGTGCTTCAGGGAATTAGTGTCTTTTTTTGGAAATCT
ATTGAAGTAAAATAACATCGGCCTTCTGTTCACTTAGGCGGCATTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCCTTTTCTGCCAACTTTGTTTTCCAGTGTTTACAAGTTGACCACTATTTGACTTCG
TTTCATTGTCCACGTAAAATAGCTGCCTTTTGTTTTCTAAGTTACAAGTACTGCCTAGAG
GTGTAGGATCCTCACAGGATAACTTTACAAAATATGATTGTTTACAGTGGCTCTTCCCCC
CCCTTCCCCCCCAGTGAGTTCTGATTTTTAAATTTTTGCCTGTGTGCAGCTCAGGTGAAA
ATCCATCTCGTTCTGGAATGGTTTTGCTTTCGGGTTTTTGGTTCTTTTGTTGTTGTCGTT
TGCTTGGGGGTGAGACCACTTCCGAGAAGCCACCACCTGCCTGTATCTGTGAAAAGGATC
TGCTCCCCAGGTGTCCCCGTCCTTTCTTTGGAAGGACTCTTAGGCTTTGTTGAATGAAGC
AGAGAAGATTGTATAGCTGGGGCTGGTCTTGGTGAACACACATTTTTTTACCCCAAACAT
CCCCTTTTTGTAGAAAGCCAAATAAAATATATACATACAATTTCCTTTTGAGCCCAGAAT
CTAGATTTGAGCGGAAGAGCATGTGTGCTTCAGGGAATTAGTGTCTTTTTTTGGAAATCT
ATTGAAGTAAAATAACATCGGCCTTCTGTTCACTTAGGCGGCATTTGT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               260-648, gnl|bosTau2|chr15 (10219565-10219952)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               260-648, gnl|bosTau2|chr15 (10219565-10219952)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               fce (0.271592)
               

               
               eye (0.170503)
               

               
               hyp (0.142837)
               

               
               ese (0.126502)
               

               
               ebs (0.118301)
               

               
               ecc (0.115035)
               

               
               eje (0.0988338)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               eye (0.170503)
               

               
               hyp (0.142837)
               

               
               ese (0.126502)
               

               
               ebs (0.118301)
               

               
               ecc (0.115035)
               

               
               eje (0.0988338)

	fce (0.271592)
	eye (0.170503)
	hyp (0.142837)
	ese (0.126502)
	ebs (0.118301)
	ecc (0.115035)
	eje (0.0988338)