Ss1.1-rebs30c_o18.5.5
|
CTGCCTTACGGAGGTGGCAGCCATCGCCCGCCTGGCATCATGGCTGCTCTCAGACCCCTT
GTGAAGCCCAAGATCGTCAAAAAGAGGACCAAGAAGTTCATCCGGCACCAGTCAGACCGA
TATGTCAAAATTAAGCGGAACTGGCGGAAACCCAGAGGCATTGACAACAGGGTGCGGAGA
AGGTTCAAGGGCCAGATCTTGATGCCCAACATTGGTTATGGGAGCAACAAGAAAACAAAG
CACATGCTGCCCAGTGGCTTCCGGAAGTTTCTGGTACACAATGTAAAAGAGCTTGAAGTG
CTGCTAATGTGCAACAAATCATACTGTGCTGAGATTGCTCACAACGTCTCTTCCAAGAAC
CGCAAAGCCATCGTCGAGAGAGCGGCCCAACTGGCCATCAGGGTCACCAATCCCAATGCC
AGGCTGCGCAGCGAAGAAAATGAATAGACAGGAGTTCCAGTTGTGGCTCAGCAGATTAAG
CACCCAGCTAGTATCCATGGTGATGCCATGATCCCTGGCCTCAGTGAGTTAAGGATCCAG
TGTTGCAACGAGTTGTGGCAGATGTGGTTTAGACCCCAAGTTGAAATGAATAGTGGGCTC
GTGTGCACATTGTTAATGTGTTAATAAAACCATGAAACTTGAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAATTTCTTTCCTGTTCATGCTCTATGGAATCTTCTATT
TGAAAGGGGTTTGTAAAGGACATGCAATCTTTTCCTTTGAAGGGCACAGGCCTCTAGGTG
CCCAGACCAGCCTTGGCCAGCTCCAGGTGGGACACATCCCTCAGAGCAAGTAGGTTCCAG
CCTCACTCTGTAAACCCTGTGTGGGTTTTGTGAAGATTGAGGAAATGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGCCTTACGGAGGTGGCAGCCATCGCCCGCCTGGCATCATGGCTGCTCTCAGACCCCTT
GTGAAGCCCAAGATCGTCAAAAAGAGGACCAAGAAGTTCATCCGGCACCAGTCAGACCGA
TATGTCAAAATTAAGCGGAACTGGCGGAAACCCAGAGGCATTGACAACAGGGTGCGGAGA
AGGTTCAAGGGCCAGATCTTGATGCCCAACATTGGTTATGGGAGCAACAAGAAAACAAAG
CACATGCTGCCCAGTGGCTTCCGGAAGTTTCTGGTACACAATGTAAAAGAGCTTGAAGTG
CTGCTAATGTGCAACAAATCATACTGTGCTGAGATTGCTCACAACGTCTCTTCCAAGAAC
CGCAAAGCCATCGTCGAGAGAGCGGCCCAACTGGCCATCAGGGTCACCAATCCCAATGCC
AGGCTGCGCAGCGAAGAAAATGAATAGACAGGAGTTCCAGTTGTGGCTCAGCAGATTAAG
CACCCAGCTAGTATCCATGGTGATGCCATGATCCCTGGCCTCAGTGAGTTAAGGATCCAG
TGTTGCAACGAGTTGTGGCAGATGTGGTTTAGACCCCAAGTTGAAATGAATAGTGGGCTC
GTGTGCACATTGTTAATGTGTTAATAAAACCATGAAACTTGAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAATTTCTTTCCTGTTCATGCTCTATGGAATCTTCTATT
TGAAAGGGGTTTGTAAAGGACATGCAATCTTTTCCTTTGAAGGGCACAGGCCTCTAGGTG
CCCAGACCAGCCTTGGCCAGCTCCAGGTGGGACACATCCCTCAGAGCAAGTAGGTTCCAG
CCTCACTCTGTAAACCCTGTGTGGGTTTTGTGAAGATTGAGGAAATGT
|
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
eje (4.74402) |
|
bla (4.72519) |
|
sto (3.59648) |
|
cje (3.30469) |
|
mgp (3.22953) |
|
gul (3.19659) |
|
med (3.02255) |
|
csk (2.95567) |
|
ecc (2.87588) |
|
nje (2.82064) |
|
ste (2.70416) |
|
elu (2.6975) |
|
lnt (2.56155) |
|
cst (2.38062) |
|
fat (2.35884) |
|
ova (2.32438) |
|
nlu (2.30017) |
|
cly (2.29219) |
|
ton (2.2815) |
|
mcp (2.21843) |
|
sug (2.16395) |
|
col (2.14509) |
|
nms (2.13858) |
|
ill (2.10711) |
|
csp (2.09542) |
|
ece (2.06375) |
|
nca (2.05311) |
|
cut (2.03908) |
|
fli (2.02881) |
|
nbm (1.98649) |
|
ebs (1.89282) |
|
lyg (1.86344) |
|
ldo (1.84305) |
|
fcc (1.78006) |
|
ssp (1.76176) |
|
aor (1.75747) |
|
tra (1.72329) |
|
jca (1.7094) |
|
mas (1.68244) |
|
amn (1.67084) |
|
lun (1.65538) |
|
nmm (1.59363) |
|
eep (1.59333) |
|
pro (1.5361) |
|
che (1.49945) |
|
nep (1.4714) |
|
hea (1.43149) |
|
fty (1.40672) |
|
ski (1.32062) |
|
pty (1.28443) |
|
thg (1.26791) |
|
fbs (1.22742) |
|
cag (1.20956) |
|
bfe (1.19886) |
|
eye (1.19352) |
|
fhi (1.18704) |
|
pgl (1.18483) |
|
ese (1.13852) |
|
mga (1.12144) |
|
fco (1.10046) |
|
sag (1.09629) |
|
cli (1.06968) |
|
rec (1.03842) |
|
cki (0.991408) |
|
nco (0.970403) |
|
cbe (0.956938) |
|
pan (0.943841) |
|
cov (0.925069) |
|
sme (0.91631) |
|
eru (0.840336) |
|
hlv (0.835538) |
|
lin (0.728014) |
|
sin (0.69979) |
|
duo (0.691204) |
|
ute (0.663922) |
|
hyp (0.571347) |
|
cmu (0.55918) |
|
fce (0.543183) |
|
ret (0.514933) |
|
jej (0.494609) |
|
clu (0.478583) |
|
eli (0.455443) |
|
tes (0.415628) |
|
kid (0.389206) |
|
isp (0.300752) |
|
mgm (0.180343) |
|
tbr (0.154178) |
|
spl (0.143184) |
|
pla (0.133672) |
|
spc (0.113366) |
|
cty (0.10408) |
|
eje (4.74402) |
|
bla (4.72519) |
|
sto (3.59648) |
|
cje (3.30469) |
|
mgp (3.22953) |
|
gul (3.19659) |
|
med (3.02255) |
|
csk (2.95567) |
|
ecc (2.87588) |
|
nje (2.82064) |
|
ste (2.70416) |
|
elu (2.6975) |
|
lnt (2.56155) |
|
cst (2.38062) |
|
fat (2.35884) |
|
ova (2.32438) |
|
nlu (2.30017) |
|
cly (2.29219) |
|
ton (2.2815) |
|
mcp (2.21843) |
|
sug (2.16395) |
|
col (2.14509) |
|
nms (2.13858) |
|
ill (2.10711) |
|
csp (2.09542) |
|
ece (2.06375) |
|
nca (2.05311) |
|
cut (2.03908) |
|
fli (2.02881) |
|
nbm (1.98649) |
|
ebs (1.89282) |
|
lyg (1.86344) |
|
ldo (1.84305) |
|
fcc (1.78006) |
|
ssp (1.76176) |
|
aor (1.75747) |
|
tra (1.72329) |
|
jca (1.7094) |
|
mas (1.68244) |
|
amn (1.67084) |
|
lun (1.65538) |
|
nmm (1.59363) |
|
eep (1.59333) |
|
pro (1.5361) |
|
che (1.49945) |
|
nep (1.4714) |
|
hea (1.43149) |
|
fty (1.40672) |
|
ski (1.32062) |
|
pty (1.28443) |
|
thg (1.26791) |
|
fbs (1.22742) |
|
cag (1.20956) |
|
bfe (1.19886) |
|
eye (1.19352) |
|
fhi (1.18704) |
|
pgl (1.18483) |
|
ese (1.13852) |
|
mga (1.12144) |
|
fco (1.10046) |
|
sag (1.09629) |
|
cli (1.06968) |
|
rec (1.03842) |
|
cki (0.991408) |
|
nco (0.970403) |
|
cbe (0.956938) |
|
pan (0.943841) |
|
cov (0.925069) |
|
sme (0.91631) |
|
eru (0.840336) |
|
hlv (0.835538) |
|
lin (0.728014) |
|
sin (0.69979) |
|
duo (0.691204) |
|
ute (0.663922) |
|
hyp (0.571347) |
|
cmu (0.55918) |
|
fce (0.543183) |
|
ret (0.514933) |
|
jej (0.494609) |
|
clu (0.478583) |
|
eli (0.455443) |
|
tes (0.415628) |
|
kid (0.389206) |
|
isp (0.300752) |
|
mgm (0.180343) |
|
tbr (0.154178) |
|
spl (0.143184) |
|
pla (0.133672) |
|
spc (0.113366) |
|
cty (0.10408) |
