Non-Coding RNA Search

Ss1.1-rebs31c_o11.5

Sequence:


               
               AAATGTGTGTTGAATTATGTAGGTAAAATGATAGGTAGCTGCACTTAAATTTCACTTTGT
AAAATCCCTAAAGTGCTGTATTAAAGGCGTCTTCTCTGTTTCATTTAATTATATTGTTTG
GCATTACTTTAAGGTTTTTGTTTTTAGTGCTTATTGGAGAATCAACTCTCTTCATATCCA
TTCGTTACAAATTTTGTGTTTTACTACTGATTTGCTTTTATTGTGAAAGTGTTTCCAGAA
GGATTGTGTTAAAGGACTTCCCTCTCTGTGTTTTACCTACATATTTTTATTGTATTTGGT
GTGCTTTTTTAGAGCAATAGATCTTATTGAGATTCTCATTTATAATTGTATTCATTTCCA
TCTCTTAGATTGTATACTTTAATATTGACTTGCTCTAATATGTTACGGATTTCTTGTCTC
TTTTACTCTACTGTAGTTTGGTTCTTTGTGTTTTACAGGTGTTGGTGTGTTAAACAACTT
ATTGTATGCTGTAGGAGGTCATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATGTGTGTTGAATTATGTAGGTAAAATGATAGGTAGCTGCACTTAAATTTCACTTTGT
AAAATCCCTAAAGTGCTGTATTAAAGGCGTCTTCTCTGTTTCATTTAATTATATTGTTTG
GCATTACTTTAAGGTTTTTGTTTTTAGTGCTTATTGGAGAATCAACTCTCTTCATATCCA
TTCGTTACAAATTTTGTGTTTTACTACTGATTTGCTTTTATTGTGAAAGTGTTTCCAGAA
GGATTGTGTTAAAGGACTTCCCTCTCTGTGTTTTACCTACATATTTTTATTGTATTTGGT
GTGCTTTTTTAGAGCAATAGATCTTATTGAGATTCTCATTTATAATTGTATTCATTTCCA
TCTCTTAGATTGTATACTTTAATATTGACTTGCTCTAATATGTTACGGATTTCTTGTCTC
TTTTACTCTACTGTAGTTTGGTTCTTTGTGTTTTACAGGTGTTGGTGTGTTAAACAACTT
ATTGTATGCTGTAGGAGGTCATGA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

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               1-391, gnl|bosTau2|chr17 (2024762-2024365)
               

               
               1-391, gnl|Hg17|chr4 (166592251-166592669)
               


               
               395-504, gnl|bosTau2|chr17 (2024314-2024202)
               

               
               395-504, gnl|Hg17|chr4 (166592722-166592828)
               

               
               395-504, gnl|Mm7|chr8 (63169265-63169156)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-391, gnl|bosTau2|chr17 (2024762-2024365)
               

               
               1-391, gnl|Hg17|chr4 (166592251-166592669)
               


               
               395-504, gnl|bosTau2|chr17 (2024314-2024202)
               

               
               395-504, gnl|Hg17|chr4 (166592722-166592828)
               

               
               395-504, gnl|Mm7|chr8 (63169265-63169156)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               aor (0.195274)
               

               
               pla (0.133672)
               

               
               thg (0.126791)
               

               
               ebs (0.118301)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               pla (0.133672)
               

               
               thg (0.126791)
               

               
               ebs (0.118301)

	1-391, gnl\|bosTau2\|chr17 (2024762-2024365)
	1-391, gnl\|Hg17\|chr4 (166592251-166592669)

	395-504, gnl\|bosTau2\|chr17 (2024314-2024202)
	395-504, gnl\|Hg17\|chr4 (166592722-166592828)
	395-504, gnl\|Mm7\|chr8 (63169265-63169156)