Ss1.1-rebs32c_f4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTGCCTGCACTGCCACTCCGCTCTGGGAGAATGGCCACTCCGAGCTCGCTGTGGCTAGG GCTGGCCCTGCTGGGGACACTGGGGGTCCTGCAAACCCCAGCCCAGGCCTCCCTGCAGCC CAACTTCCAGGAGGACAAGTTCCTGGGGCGCTGGTTCACCTCGGGCCTCGCCTCCAACTC GAGCTGGTTCCTGGAGAAGAAGAAGGTGCTGTCCATGTGCAAATCGCTGGTGGCCCCGGC GCCGGACGGCGGCTTCAACCTGACCTCCACCTTCCTCAGGAAAGACCAGTGTGTGACCCG AACTCTGATGCTGCGTCCTGCGGGCCCCCCGGGCTGCTACAGCTACACCAGCCCCCACGG GGGCAGCAACCTCGAGGTGTCGGTGGTGGAGACTGACTACGAGAACTACGCCCTGCTCCA CACCGAGAGCGGCCCGAGCCCAGGCCCGGCCTTCCGCATGGCCACGCTCTACAGCCGCAG CCAGGCCCCGGGGGCCGCGGTCAGGGAGAAGTTCACCGCCTTCGCCAAGGCGCGGGGCTT CACAGAGGACGGCATTGTCTTCCTGCCGCGCAACGAGAAGTGCCTCGAGGAGCATGAGTA GGTGACCCCCCCACTCTCAGGACCTGGCCATCCTGCACTGCTCAGCTTTTCCTCCAACAC CCCGAGACCTGAGACCCAGCGGGGCTCCTCCTGGCCCCGCCTCTGCCCCCAGGGCCTTTC TCTGCCCTGAGAATAAACTCCAGAAGCAAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTGCCTGCACTGCCACTCCGCTCTGGGAGAATGGCCACTCCGAGCTCGCTGTGGCTAGG GCTGGCCCTGCTGGGGACACTGGGGGTCCTGCAAACCCCAGCCCAGGCCTCCCTGCAGCC CAACTTCCAGGAGGACAAGTTCCTGGGGCGCTGGTTCACCTCGGGCCTCGCCTCCAACTC GAGCTGGTTCCTGGAGAAGAAGAAGGTGCTGTCCATGTGCAAATCGCTGGTGGCCCCGGC GCCGGACGGCGGCTTCAACCTGACCTCCACCTTCCTCAGGAAAGACCAGTGTGTGACCCG AACTCTGATGCTGCGTCCTGCGGGCCCCCCGGGCTGCTACAGCTACACCAGCCCCCACGG GGGCAGCAACCTCGAGGTGTCGGTGGTGGAGACTGACTACGAGAACTACGCCCTGCTCCA CACCGAGAGCGGCCCGAGCCCAGGCCCGGCCTTCCGCATGGCCACGCTCTACAGCCGCAG CCAGGCCCCGGGGGCCGCGGTCAGGGAGAAGTTCACCGCCTTCGCCAAGGCGCGGGGCTT CACAGAGGACGGCATTGTCTTCCTGCCGCGCAACGAGAAGTGCCTCGAGGAGCATGAGTA GGTGACCCCCCCACTCTCAGGACCTGGCCATCCTGCACTGCTCAGCTTTTCCTCCAACAC CCCGAGACCTGAGACCCAGCGGGGCTCCTCCTGGCCCCGCCTCTGCCCCCAGGGCCTTTC TCTGCCCTGAGAATAAACTCCAGAAGCAAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 138-280, gnl|bosTau2|chr11 (86305761-86305903) | |
| 138-280, gnl|canFam2|chr9 (51982735-51982567) | |
| 138-280, gnl|dasNov1|scaffold_202979 (1267-1098) | |
| 138-280, gnl|hg17|chr9 (137149252-137149420) | |
| 138-280, gnl|Hg17|chr9 (137149280-137149422) | |
| 138-280, gnl|loxAfr1|scaffold_81045 (4937-5096) | |
| 138-280, gnl|mm7|chr2 (25476467-25476302) | |
| 138-280, gnl|Mm7|chr2 (25476440-25476298) | |
| 138-280, gnl|panTro1|chr11 (121919972-121920140) | |
| 138-280, gnl|rheMac2|chr15 (1278768-1278600) | |
| 138-280, gnl|rn3|chr3 (3635094-3634929) | |
| 138-280, gnl|xenTro1|scaffold_2821 (17454-17608) | |
| 357-474, gnl|bosTau2|chr11 (86306448-86306565) | |
| 357-474, gnl|canFam2|chr9 (51981761-51981614) | |
| 357-474, gnl|echTel1|scaffold_123033 (466-609) | |
| 357-474, gnl|hg17|chr9 (137150212-137150359) | |
| 357-474, gnl|Hg17|chr9 (137150235-137150352) | |
| 357-474, gnl|loxAfr1|scaffold_81045 (6209-6354) | |
| 357-474, gnl|mm7|chr2 (25475524-25475377) | |
| 357-474, gnl|Mm7|chr2 (25475499-25475382) | |
| 357-474, gnl|panTro1|chr11 (121920932-121921079) | |
| 357-474, gnl|rheMac2|chr15 (1277812-1277665) | |
| 357-474, gnl|rn3|chr3 (3634116-3633969) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 138-280, gnl|bosTau2|chr11 (86305761-86305903) | |
| 138-280, gnl|canFam2|chr9 (51982735-51982567) | |
| 138-280, gnl|dasNov1|scaffold_202979 (1267-1098) | |
| 138-280, gnl|hg17|chr9 (137149252-137149420) | |
| 138-280, gnl|Hg17|chr9 (137149280-137149422) | |
| 138-280, gnl|loxAfr1|scaffold_81045 (4937-5096) | |
| 138-280, gnl|mm7|chr2 (25476467-25476302) | |
| 138-280, gnl|Mm7|chr2 (25476440-25476298) | |
| 138-280, gnl|panTro1|chr11 (121919972-121920140) | |
| 138-280, gnl|rheMac2|chr15 (1278768-1278600) | |
| 138-280, gnl|rn3|chr3 (3635094-3634929) | |
| 138-280, gnl|xenTro1|scaffold_2821 (17454-17608) | |
| 357-474, gnl|bosTau2|chr11 (86306448-86306565) | |
| 357-474, gnl|canFam2|chr9 (51981761-51981614) | |
| 357-474, gnl|echTel1|scaffold_123033 (466-609) | |
| 357-474, gnl|hg17|chr9 (137150212-137150359) | |
| 357-474, gnl|Hg17|chr9 (137150235-137150352) | |
| 357-474, gnl|loxAfr1|scaffold_81045 (6209-6354) | |
| 357-474, gnl|mm7|chr2 (25475524-25475377) | |
| 357-474, gnl|Mm7|chr2 (25475499-25475382) | |
| 357-474, gnl|panTro1|chr11 (121920932-121921079) | |
| 357-474, gnl|rheMac2|chr15 (1277812-1277665) | |
| 357-474, gnl|rn3|chr3 (3634116-3633969) |
| Expressed library(ies): 23 entry(ies) | More info |
| Expressed library(ies): 23 entry(ies) | Help | Less info |
| hyp (14.5693) | |
| fhi (2.88282) | |
| fbs (1.75346) | |
| fcc (1.18671) | |
| fce (1.08637) | |
| ece (0.687916) | |
| nmm (0.531209) | |
| ebs (0.473205) | |
| pty (0.428143) | |
| mas (0.42061) | |
| hlv (0.278513) | |
| pla (0.267344) | |
| eru (0.240096) | |
| pgl (0.236967) | |
| ton (0.1755) | |
| eye (0.170503) | |
| nje (0.16592) | |
| nco (0.161734) | |
| lnt (0.142308) | |
| cst (0.140036) | |
| med (0.116252) | |
| spc (0.113366) | |
| nbm (0.0993246) |
| Expressed library(ies): 23 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (14.5693) | |
| fhi (2.88282) | |
| fbs (1.75346) | |
| fcc (1.18671) | |
| fce (1.08637) | |
| ece (0.687916) | |
| nmm (0.531209) | |
| ebs (0.473205) | |
| pty (0.428143) | |
| mas (0.42061) | |
| hlv (0.278513) | |
| pla (0.267344) | |
| eru (0.240096) | |
| pgl (0.236967) | |
| ton (0.1755) | |
| eye (0.170503) | |
| nje (0.16592) | |
| nco (0.161734) | |
| lnt (0.142308) | |
| cst (0.140036) | |
| med (0.116252) | |
| spc (0.113366) | |
| nbm (0.0993246) |