Ss1.1-rebs32c_n24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGTGGGAGGCTGTTTGCAGAGGCAGTGTTTGCCATGAAAGTCTACGGAGCTTCCCTTC TAAGTAGCGAAGCCGATTTCAGCTCCTCCAGCAGCACGGGCAGCATCTCGGCGCCTGAGG TCCACATGTCTGCTGCCGGAAGCAAGAGATCCTCTTTCCCACGCAATCGAGGTCCCCATG GGCGGAGCAATGGAGCATCATCCTACAAGCCTGGCAACAGCCCTCCCTCCCCTCGGGAGA AGGACCTTCTGTCCATGTTGTGCAGGAATCAGCTGAGTCCCATAAACACCCATCCCAGTT ATGCACCTTCATCCCCCAGTAGCAGCAACTCCGGCTCCTACAAAGGAAGTGACTGCAGCC CCATCCTGAGGCGGTCTGGAAGGTACATGTCCTGTGGTGAAAATCATGGTGTCAAACCCC CAAATCCAGAGCAGTACCTGACTCCTCTGCAGCAGAAGGAGGTAACAGTGAGACACCTGA AGACCAAGCTCAAGGAATCTGAGCGCAGACTGCATGAGAGGGAGAGTGAGATTGTGGAGC TGAAGTCCCAGCTGGCCCGGATGCGGGAAGACTGGATTGAAGAAGAGTGCCACCGGGTGG AGGCCCAGCTGGCCCTCAAGGAAGCCAGGAAGGAGATTAAACAGCTCAAACAGGTCATTG AAACTATGAGGAGCAGCTTGGCAGATAAAGACAAAGGCATCCAGAAATATTTTGTGGACA TAAACATTCAAAACAAGAAGTTGGAGTCTCTGCTTCAGAGCATGGAGATGGCACACAGTG GCTCTCTGAGGGACGAGCTGTGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGTGGGAGGCTGTTTGCAGAGGCAGTGTTTGCCATGAAAGTCTACGGAGCTTCCCTTC TAAGTAGCGAAGCCGATTTCAGCTCCTCCAGCAGCACGGGCAGCATCTCGGCGCCTGAGG TCCACATGTCTGCTGCCGGAAGCAAGAGATCCTCTTTCCCACGCAATCGAGGTCCCCATG GGCGGAGCAATGGAGCATCATCCTACAAGCCTGGCAACAGCCCTCCCTCCCCTCGGGAGA AGGACCTTCTGTCCATGTTGTGCAGGAATCAGCTGAGTCCCATAAACACCCATCCCAGTT ATGCACCTTCATCCCCCAGTAGCAGCAACTCCGGCTCCTACAAAGGAAGTGACTGCAGCC CCATCCTGAGGCGGTCTGGAAGGTACATGTCCTGTGGTGAAAATCATGGTGTCAAACCCC CAAATCCAGAGCAGTACCTGACTCCTCTGCAGCAGAAGGAGGTAACAGTGAGACACCTGA AGACCAAGCTCAAGGAATCTGAGCGCAGACTGCATGAGAGGGAGAGTGAGATTGTGGAGC TGAAGTCCCAGCTGGCCCGGATGCGGGAAGACTGGATTGAAGAAGAGTGCCACCGGGTGG AGGCCCAGCTGGCCCTCAAGGAAGCCAGGAAGGAGATTAAACAGCTCAAACAGGTCATTG AAACTATGAGGAGCAGCTTGGCAGATAAAGACAAAGGCATCCAGAAATATTTTGTGGACA TAAACATTCAAAACAAGAAGTTGGAGTCTCTGCTTCAGAGCATGGAGATGGCACACAGTG GCTCTCTGAGGGACGAGCTGTGTC |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 64-166, gnl|bosTau2|chr14 (33050298-33050400) | |
| 64-166, gnl|canFam2|chr13 (13160657-13160786) | |
| 64-166, gnl|dasNov1|scaffold_12419 (21902-21775) | |
| 64-166, gnl|echTel1|scaffold_295311 (47750-47880) | |
| 64-166, gnl|fr1|chrUn (278971749-278971633) | |
| 64-166, gnl|galGal2|chr2 (131042602-131042733) | |
| 64-166, gnl|hg17|chr8 (110667461-110667591) | |
| 64-166, gnl|Hg17|chr8 (110667567-110667465) | |
| 64-166, gnl|loxAfr1|scaffold_19318 (44906-44777) | |
| 64-166, gnl|mm7|chr15 (44728290-44728420) | |
| 64-166, gnl|Mm7|chr15 (44728396-44728294) | |
| 64-166, gnl|oryCun1|scaffold_201190 (103190-103320) | |
| 64-166, gnl|panTro1|chr7 (113147265-113147395) | |
| 64-166, gnl|rheMac2|chr8 (111993486-111993616) | |
| 64-166, gnl|rn3|chr7 (80583005-80583137) | |
| 64-166, gnl|tetNig1|chr8 (1844338-1844458) | |
| 64-166, gnl|xenTro1|scaffold_1209 (178108-178238) | |
| 519-783, gnl|bosTau2|chr13 (41267697-41267961) | |
| 519-783, gnl|Hg17|chr20 (1233520-1233784) | |
| 519-783, gnl|Mm7|chr2 (151335458-151335194) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 64-166, gnl|bosTau2|chr14 (33050298-33050400) | |
| 64-166, gnl|canFam2|chr13 (13160657-13160786) | |
| 64-166, gnl|dasNov1|scaffold_12419 (21902-21775) | |
| 64-166, gnl|echTel1|scaffold_295311 (47750-47880) | |
| 64-166, gnl|fr1|chrUn (278971749-278971633) | |
| 64-166, gnl|galGal2|chr2 (131042602-131042733) | |
| 64-166, gnl|hg17|chr8 (110667461-110667591) | |
| 64-166, gnl|Hg17|chr8 (110667567-110667465) | |
| 64-166, gnl|loxAfr1|scaffold_19318 (44906-44777) | |
| 64-166, gnl|mm7|chr15 (44728290-44728420) | |
| 64-166, gnl|Mm7|chr15 (44728396-44728294) | |
| 64-166, gnl|oryCun1|scaffold_201190 (103190-103320) | |
| 64-166, gnl|panTro1|chr7 (113147265-113147395) | |
| 64-166, gnl|rheMac2|chr8 (111993486-111993616) | |
| 64-166, gnl|rn3|chr7 (80583005-80583137) | |
| 64-166, gnl|tetNig1|chr8 (1844338-1844458) | |
| 64-166, gnl|xenTro1|scaffold_1209 (178108-178238) | |
| 519-783, gnl|bosTau2|chr13 (41267697-41267961) | |
| 519-783, gnl|Hg17|chr20 (1233520-1233784) | |
| 519-783, gnl|Mm7|chr2 (151335458-151335194) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.354904) | |
| nmm (0.132802) |