Non-Coding RNA Search

Ss1.1-rebs34c_f6.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTAATACTAGGGTATCATTTAAAAAGT
ACACTGTATTTTTTTTTTTTTTTTGGAATGACTATGGTATGGACAATTTCAAAAAACCAA
AAACTCCTTGGTAATAGTGGAAATGGAAACTGGTAACTCACTGATGGAATAAATAGTCTT
GCATTTTAAAAGCTTATGAGAAACTCAATTTGAAATGATTAAAAAATGTCAAGTATTATA
AGCTGGTATTTAAGATGCTTGTAAATATTATTTATGTTTTTAATTTTGTAAAATAAAGAT
GTCTTTTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTAATACTAGGGTATCATTTAAAAAGT
ACACTGTATTTTTTTTTTTTTTTTGGAATGACTATGGTATGGACAATTTCAAAAAACCAA
AAACTCCTTGGTAATAGTGGAAATGGAAACTGGTAACTCACTGATGGAATAAATAGTCTT
GCATTTTAAAAGCTTATGAGAAACTCAATTTGAAATGATTAAAAAATGTCAAGTATTATA
AGCTGGTATTTAAGATGCTTGTAAATATTATTTATGTTTTTAATTTTGTAAAATAAAGAT
GTCTTTTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               187-300, gnl|bosTau2|chr25 (18040355-18040468)
               

               
               187-300, gnl|Hg17|chr5 (154236414-154236526)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               187-300, gnl|bosTau2|chr25 (18040355-18040468)
               

               
               187-300, gnl|Hg17|chr5 (154236414-154236526)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               ebs (0.118301)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               ebs (0.118301)
               

               
               eje (0.0988338)

	187-300, gnl\|bosTau2\|chr25 (18040355-18040468)
	187-300, gnl\|Hg17\|chr5 (154236414-154236526)