Non-Coding RNA Search

Ss1.1-recc2801c_j22.5

Sequence:


               
               GCTGCGTGGAGCTATCAGTCGAAGCTTGCGTGCTGAACTAAACCTGGAGCTCGTTGGAGG
ACTTTGCCCCAGATGTGAGCGGTGTGAGGACGATGGTCTTTGCCGATCGAAGGGATAGGG
TTCAAGACCAAGGCTTGTGAATTGAGACCGTTGGGCTGTGGGCTCTTAAAGGCTGTCCAG
GCTCCGGACTGCATTGCCCAATGTCTACGGTACCCGAAGCAACGTTCTGTCCGCGCACCG
GCTCTTTCAGGACCGTAGGAGGGATCGCGCGCGCGTCCCCGAGGAACATCCGCAGCTTGA
GGGAACCGCAGAGTCAGATATGAAATCCAATTGTCAGACCAAGAAGTTGTCACCAAAAAA
TGGCATTTTTGACAGAGGATTACCTCAGCGGGAAATAATGGAAATTTGTGAAAAACACAG
CCTTGAATGTTTATGTTTTAGAGGTGATTGGGAAAGCAAAGATCAGTTTGAAACATGACA
GGAAAATCAGGAAGAATGTTCTAAGCAGGTTATACGCACCTGTGAAAAAATCCCCACTTT
TAACCAGCACATGGCTTCTAATGTGCATCAGAGACTTAATACAAGAAAGAAACTGAATAA
ACTTAAAGGGTGTACAAAAGCCTTTTGTTCTGGCTCAGACTGTATTCAACATCATTTAAT
TCACACTGGTGAAAAATTTTGTAAAGATAAAGAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCGTGGAGCTATCAGTCGAAGCTTGCGTGCTGAACTAAACCTGGAGCTCGTTGGAGG
ACTTTGCCCCAGATGTGAGCGGTGTGAGGACGATGGTCTTTGCCGATCGAAGGGATAGGG
TTCAAGACCAAGGCTTGTGAATTGAGACCGTTGGGCTGTGGGCTCTTAAAGGCTGTCCAG
GCTCCGGACTGCATTGCCCAATGTCTACGGTACCCGAAGCAACGTTCTGTCCGCGCACCG
GCTCTTTCAGGACCGTAGGAGGGATCGCGCGCGCGTCCCCGAGGAACATCCGCAGCTTGA
GGGAACCGCAGAGTCAGATATGAAATCCAATTGTCAGACCAAGAAGTTGTCACCAAAAAA
TGGCATTTTTGACAGAGGATTACCTCAGCGGGAAATAATGGAAATTTGTGAAAAACACAG
CCTTGAATGTTTATGTTTTAGAGGTGATTGGGAAAGCAAAGATCAGTTTGAAACATGACA
GGAAAATCAGGAAGAATGTTCTAAGCAGGTTATACGCACCTGTGAAAAAATCCCCACTTT
TAACCAGCACATGGCTTCTAATGTGCATCAGAGACTTAATACAAGAAAGAAACTGAATAA
ACTTAAAGGGTGTACAAAAGCCTTTTGTTCTGGCTCAGACTGTATTCAACATCATTTAAT
TCACACTGGTGAAAAATTTTGTAAAGATAAAGAATG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-315, gnl|bosTau2|chr18 (44267121-44266814)
               

               
               1-315, gnl|Hg17|chr19 (42021374-42021081)
               

               
               1-315, gnl|Mm7|chr7 (26761503-26761800)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-315, gnl|bosTau2|chr18 (44267121-44266814)
               

               
               1-315, gnl|Hg17|chr19 (42021374-42021081)
               

               
               1-315, gnl|Mm7|chr7 (26761503-26761800)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ecc (0.115035)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)
               

               
               cty (0.10408)

	1-315, gnl\|bosTau2\|chr18 (44267121-44266814)
	1-315, gnl\|Hg17\|chr19 (42021374-42021081)
	1-315, gnl\|Mm7\|chr7 (26761503-26761800)