Ss1.1-recc2801c_m7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTGCGCTGCCCCTGAAGACCGAGCACAAGCAGTTCCTGGTTCGGGTCCTGATTCCCCTG CACTCGGTCAAGTCGCTGTCTGTCTTTCACGCCCAGCTGGCATACTGTGTGGTGCAGTTC CTGGAGAAGGATGCCACCTTGACAGAGCATGTCATCCGGGGACTGCTCAAGTACTGGCCC AAAACCTGTACCCAGAAGGAGGTGATGTTTCTGGGGGAGATGGAAGAGATTCTGGATGTC ATCGAGCCCTCCCAGTTTGTGAAGATTCAGGAGCCCCTCTTCAAGCAGGTGGCTCGCTGT GTGTCCAGCCCCCATTTCCAGGTTGCAGAGCGGGCTCTGTATTTCTGGAACAATGAGTAT ATCCTGAGCCTCATTGAGGACAACTGCCATACTGTGCTGCCTGCTGTGTTTGGGACCCTC TACCAAGTCTCCAAGGAGCACTGGAATCAAACCATCGTATCTCTGATCTACAACGTGCTC AAGACCTTCATGGAGATGAATGGGAAGCTGTTTGATGAGCTCACAGCCTCCTACAAGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTGCGCTGCCCCTGAAGACCGAGCACAAGCAGTTCCTGGTTCGGGTCCTGATTCCCCTG CACTCGGTCAAGTCGCTGTCTGTCTTTCACGCCCAGCTGGCATACTGTGTGGTGCAGTTC CTGGAGAAGGATGCCACCTTGACAGAGCATGTCATCCGGGGACTGCTCAAGTACTGGCCC AAAACCTGTACCCAGAAGGAGGTGATGTTTCTGGGGGAGATGGAAGAGATTCTGGATGTC ATCGAGCCCTCCCAGTTTGTGAAGATTCAGGAGCCCCTCTTCAAGCAGGTGGCTCGCTGT GTGTCCAGCCCCCATTTCCAGGTTGCAGAGCGGGCTCTGTATTTCTGGAACAATGAGTAT ATCCTGAGCCTCATTGAGGACAACTGCCATACTGTGCTGCCTGCTGTGTTTGGGACCCTC TACCAAGTCTCCAAGGAGCACTGGAATCAAACCATCGTATCTCTGATCTACAACGTGCTC AAGACCTTCATGGAGATGAATGGGAAGCTGTTTGATGAGCTCACAGCCTCCTACAAGCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 315-448, gnl|bosTau2|chr16 (53243849-53243716) | |
| 315-448, gnl|canFam2|chr7 (13522443-13522603) | |
| 315-448, gnl|danRer3|chr20 (23583522-23583672) | |
| 315-448, gnl|dasNov1|scaffold_11712 (23199-23041) | |
| 315-448, gnl|echTel1|scaffold_314755 (137648-137808) | |
| 315-448, gnl|fr1|chrUn (80648849-80648684) | |
| 315-448, gnl|galGal2|chr3 (18295992-18295850) | |
| 315-448, gnl|hg17|chr1 (208918885-208919047) | |
| 315-448, gnl|Hg17|chr1 (208918887-208919020) | |
| 315-448, gnl|loxAfr1|scaffold_15530 (3379-3517) | |
| 315-448, gnl|mm7|chr1 (190908175-190908024) | |
| 315-448, gnl|Mm7|chr1 (190908170-190908038) | |
| 315-448, gnl|monDom2|scaffold_13 (16240552-16240710) | |
| 315-448, gnl|oryCun1|scaffold_109221 (7839-7677) | |
| 315-448, gnl|panTro1|chr1 (192555858-192556020) | |
| 315-448, gnl|rheMac2|chr1 (158047217-158047055) | |
| 315-448, gnl|rn3|chr13 (107605483-107605333) | |
| 315-448, gnl|tetNig1|chr14 (4223209-4223362) | |
| 315-448, gnl|xenTro1|scaffold_68 (1413406-1413258) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 315-448, gnl|bosTau2|chr16 (53243849-53243716) | |
| 315-448, gnl|canFam2|chr7 (13522443-13522603) | |
| 315-448, gnl|danRer3|chr20 (23583522-23583672) | |
| 315-448, gnl|dasNov1|scaffold_11712 (23199-23041) | |
| 315-448, gnl|echTel1|scaffold_314755 (137648-137808) | |
| 315-448, gnl|fr1|chrUn (80648849-80648684) | |
| 315-448, gnl|galGal2|chr3 (18295992-18295850) | |
| 315-448, gnl|hg17|chr1 (208918885-208919047) | |
| 315-448, gnl|Hg17|chr1 (208918887-208919020) | |
| 315-448, gnl|loxAfr1|scaffold_15530 (3379-3517) | |
| 315-448, gnl|mm7|chr1 (190908175-190908024) | |
| 315-448, gnl|Mm7|chr1 (190908170-190908038) | |
| 315-448, gnl|monDom2|scaffold_13 (16240552-16240710) | |
| 315-448, gnl|oryCun1|scaffold_109221 (7839-7677) | |
| 315-448, gnl|panTro1|chr1 (192555858-192556020) | |
| 315-448, gnl|rheMac2|chr1 (158047217-158047055) | |
| 315-448, gnl|rn3|chr13 (107605483-107605333) | |
| 315-448, gnl|tetNig1|chr14 (4223209-4223362) | |
| 315-448, gnl|xenTro1|scaffold_68 (1413406-1413258) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| ecc (0.115035) |