Ss1.1-recc2802c_c11.5
|
CTGTCCGACATCTTAGCGAGGAGGCACTACTGGTAGCTGCTCTCCCGGCTTCGCTATGCC
GCCCAAGGACGACAAGAAGAAGAAAGATGCCGGAAAGTCGGCCAAGAAAGACAAAGACCC
AGTGAACAAATCTGGGGGCAAGGCCAAAAAGAAGAAGTGGTCCAAAGGCAAAGTTCGGGA
CAAGCTCAATAACCTAGTCTTGTTTGACAAAGCGACATATGACAAACTCTGTAAAGAAGT
TCCCAACTATAAGCTTATAACTCCAGCTGTTGTCTCTGAGAGACTGAAGATTCGTGGTTC
TCTGGCCAGGGCAGCCCTTCAGGAACTCCTGAGCAAAGGACTTATTAAACTGGTTTCAAA
GCACAGAGCTCAAGTAATTTACACCCGAAATACCAAGGGTGGAGATGCCCCAGCTGCTGG
AGAAGATGCATAAACAGGTCCAACCAACTGTACACTGTACATTTTGAAAAATAAAACTTT
AATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGTCCGACATCTTAGCGAGGAGGCACTACTGGTAGCTGCTCTCCCGGCTTCGCTATGCC
GCCCAAGGACGACAAGAAGAAGAAAGATGCCGGAAAGTCGGCCAAGAAAGACAAAGACCC
AGTGAACAAATCTGGGGGCAAGGCCAAAAAGAAGAAGTGGTCCAAAGGCAAAGTTCGGGA
CAAGCTCAATAACCTAGTCTTGTTTGACAAAGCGACATATGACAAACTCTGTAAAGAAGT
TCCCAACTATAAGCTTATAACTCCAGCTGTTGTCTCTGAGAGACTGAAGATTCGTGGTTC
TCTGGCCAGGGCAGCCCTTCAGGAACTCCTGAGCAAAGGACTTATTAAACTGGTTTCAAA
GCACAGAGCTCAAGTAATTTACACCCGAAATACCAAGGGTGGAGATGCCCCAGCTGCTGG
AGAAGATGCATAAACAGGTCCAACCAACTGTACACTGTACATTTTGAAAAATAAAACTTT
AATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
sto (3.95612) |
|
fty (3.86847) |
|
eje (3.26151) |
|
sme (3.05437) |
|
che (2.99891) |
|
med (2.6738) |
|
ecc (2.64581) |
|
nco (2.58774) |
|
nca (2.46373) |
|
cst (2.24058) |
|
aor (2.14802) |
|
nms (2.13858) |
|
amn (2.08855) |
|
sag (2.00987) |
|
cje (1.98282) |
|
jca (1.93732) |
|
ill (1.93152) |
|
elu (1.92678) |
|
cut (1.86916) |
|
lnt (1.85001) |
|
ton (1.755) |
|
pty (1.71257) |
|
mcp (1.70648) |
|
eye (1.70503) |
|
csk (1.68895) |
|
mas (1.68244) |
|
ute (1.59341) |
|
nlu (1.53345) |
|
nje (1.49328) |
|
ese (1.39152) |
|
ece (1.37583) |
|
fce (1.35796) |
|
col (1.17005) |
|
hyp (1.14269) |
|
csp (1.1283) |
|
nmm (1.06242) |
|
rec (1.03842) |
|
ova (1.03306) |
|
spc (1.02029) |
|
fhi (1.01747) |
|
fli (1.0144) |
|
fcc (0.988924) |
|
eru (0.960384) |
|
nep (0.919625) |
|
nbm (0.893921) |
|
jej (0.890296) |
|
duo (0.864006) |
|
eep (0.857948) |
|
hlv (0.835538) |
|
cki (0.826173) |
|
mga (0.801025) |
|
ebs (0.709807) |
|
mgp (0.692042) |
|
ssp (0.677599) |
|
fbs (0.526039) |
|
sin (0.524843) |
|
cbl (0.45919) |
|
eli (0.455443) |
|
bfe (0.449573) |
|
tes (0.415628) |
|
pla (0.401016) |
|
cov (0.396458) |
|
clu (0.358938) |
|
pgl (0.35545) |
|
fat (0.294855) |
|
ski (0.29347) |
|
cte (0.29274) |
|
cga (0.279096) |
|
lyg (0.266205) |
|
kid (0.259471) |
|
thg (0.253582) |
|
cly (0.241284) |
|
cbe (0.239234) |
|
hea (0.204499) |
|
cmu (0.186393) |
|
mgm (0.180343) |
|
fco (0.157208) |
|
cli (0.152812) |
|
cag (0.151194) |
|
lun (0.150489) |
|
isp (0.150376) |
|
ste (0.135208) |
|
ret (0.128733) |
|
cty (0.10408) |
|
ldo (0.0970026) |
|
sto (3.95612) |
|
fty (3.86847) |
|
eje (3.26151) |
|
sme (3.05437) |
|
che (2.99891) |
|
med (2.6738) |
|
ecc (2.64581) |
|
nco (2.58774) |
|
nca (2.46373) |
|
cst (2.24058) |
|
aor (2.14802) |
|
nms (2.13858) |
|
amn (2.08855) |
|
sag (2.00987) |
|
cje (1.98282) |
|
jca (1.93732) |
|
ill (1.93152) |
|
elu (1.92678) |
|
cut (1.86916) |
|
lnt (1.85001) |
|
ton (1.755) |
|
pty (1.71257) |
|
mcp (1.70648) |
|
eye (1.70503) |
|
csk (1.68895) |
|
mas (1.68244) |
|
ute (1.59341) |
|
nlu (1.53345) |
|
nje (1.49328) |
|
ese (1.39152) |
|
ece (1.37583) |
|
fce (1.35796) |
|
col (1.17005) |
|
hyp (1.14269) |
|
csp (1.1283) |
|
nmm (1.06242) |
|
rec (1.03842) |
|
ova (1.03306) |
|
spc (1.02029) |
|
fhi (1.01747) |
|
fli (1.0144) |
|
fcc (0.988924) |
|
eru (0.960384) |
|
nep (0.919625) |
|
nbm (0.893921) |
|
jej (0.890296) |
|
duo (0.864006) |
|
eep (0.857948) |
|
hlv (0.835538) |
|
cki (0.826173) |
|
mga (0.801025) |
|
ebs (0.709807) |
|
mgp (0.692042) |
|
ssp (0.677599) |
|
fbs (0.526039) |
|
sin (0.524843) |
|
cbl (0.45919) |
|
eli (0.455443) |
|
bfe (0.449573) |
|
tes (0.415628) |
|
pla (0.401016) |
|
cov (0.396458) |
|
clu (0.358938) |
|
pgl (0.35545) |
|
fat (0.294855) |
|
ski (0.29347) |
|
cte (0.29274) |
|
cga (0.279096) |
|
lyg (0.266205) |
|
kid (0.259471) |
|
thg (0.253582) |
|
cly (0.241284) |
|
cbe (0.239234) |
|
hea (0.204499) |
|
cmu (0.186393) |
|
mgm (0.180343) |
|
fco (0.157208) |
|
cli (0.152812) |
|
cag (0.151194) |
|
lun (0.150489) |
|
isp (0.150376) |
|
ste (0.135208) |
|
ret (0.128733) |
|
cty (0.10408) |
|
ldo (0.0970026) |
