Ss1.1-recc2803c_g24.5
|
CTCCACCTCGGGTCGGAGGTGGGCTTTTCCTGGGCCTGGCACGGAGAGCTCTGGGCCCGA
GCGCGTGCAGAGCGGCGGGACGAGTGGATGTGCCTTGCATGAAGTGTGGGTTGCTCCCGG
GCTCGCCTGGTCCCCTTCTTCCTCTTCAGCTCCACCACAGCTTCCTAGTGTCCCAGGCCC
TCCCGCCGCCACCACCAACCACGTCCTCCCTCGCCCCCCAACATCAGCACTCCCCCTCGG
GAGCCGGAGCTGCTGTCACCCACGCCTGGCTCCGCTCCGGCCCGTCCACGCAGGAGAGCC
CTCAGGCCTGTTGAACTTGCTCTCTAAGAGAGGTTGGGACCAGGCTGGGTTCAGGGTGAC
ACCCAGGAGAGGTGGTGGCCCTCACACGCTGACACGGAATGAGGACCAGGGAGCTGCTGG
GAAAGAAACAGCTGTAGGTGCCTTGCTCTTCTGTCCCACGGGGCTGGGGGACAGCAGCTC
GGGCTCTTGGGCCTTGGCCGCGCAGACGGAAGCCGACGTCTGTCCCCGCTCAGCCCCACC
CCAGGGCCCCAGGAGGCCGGGGCAGCAGCACACACAGGCCAGGGCAAGCGCTGGGGCCTC
TCCCATGGACTCTGCCCCTCCCTCCATCGGATGCTCAGGCTGGGAGGCGGCATGTAGCTC
ACTGAACACAGAGCCAGCCAGCCCCTCTCAAAGGAGAGCGAGGCCTCCTGCCAGCCCTGG
GCTGGCAGGCTCCATGCGGGAGGGAGGCGGCCGGCGGGGTCCTCCTTCCTCGCAGAGACA
GGCCCAGAGGTTTACACGTTTTCTAAGCGTTTGATAATGTGAAGCTCCAGGCTGAGAGGA
TGCTTTGAGCACACTGCAGCTGTGTAACTTGGGGTGTATGTATGTAATATTTAAGGTTGA
AAGAAAATAAATCTCAAAAGCAAAGATATTAACTCTTATTAGAAAAAAAGACAAAATAAG
AAGCCAAAGCATGATGCGTCTTGTCCGCCTTACGCTGGCTCCACGCCTGAGCTGCCACGA
CCACGCAGCCGGCAGCAGCGAGGGAAGGATGGGGCCGGACCTCGGGCTGCAGCCTTGGGA
GCCCAGAGTCGGTGTCCTGTGCGAGGGACGGGACGTCCCGAGTGGCTGGTGGGACTGCGC
TTCCCGGTGCGCTGTTGACGTGGAGATGTGAATGCCTACTGCTTAAGATATCTGTATAAA
GTGCTGTGTGATTAAACTTTTTTTTTACTTGCATTTTTTTCGTTTGGCTCATTACAATGT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCCACCTCGGGTCGGAGGTGGGCTTTTCCTGGGCCTGGCACGGAGAGCTCTGGGCCCGA
GCGCGTGCAGAGCGGCGGGACGAGTGGATGTGCCTTGCATGAAGTGTGGGTTGCTCCCGG
GCTCGCCTGGTCCCCTTCTTCCTCTTCAGCTCCACCACAGCTTCCTAGTGTCCCAGGCCC
TCCCGCCGCCACCACCAACCACGTCCTCCCTCGCCCCCCAACATCAGCACTCCCCCTCGG
GAGCCGGAGCTGCTGTCACCCACGCCTGGCTCCGCTCCGGCCCGTCCACGCAGGAGAGCC
CTCAGGCCTGTTGAACTTGCTCTCTAAGAGAGGTTGGGACCAGGCTGGGTTCAGGGTGAC
ACCCAGGAGAGGTGGTGGCCCTCACACGCTGACACGGAATGAGGACCAGGGAGCTGCTGG
GAAAGAAACAGCTGTAGGTGCCTTGCTCTTCTGTCCCACGGGGCTGGGGGACAGCAGCTC
GGGCTCTTGGGCCTTGGCCGCGCAGACGGAAGCCGACGTCTGTCCCCGCTCAGCCCCACC
CCAGGGCCCCAGGAGGCCGGGGCAGCAGCACACACAGGCCAGGGCAAGCGCTGGGGCCTC
TCCCATGGACTCTGCCCCTCCCTCCATCGGATGCTCAGGCTGGGAGGCGGCATGTAGCTC
ACTGAACACAGAGCCAGCCAGCCCCTCTCAAAGGAGAGCGAGGCCTCCTGCCAGCCCTGG
GCTGGCAGGCTCCATGCGGGAGGGAGGCGGCCGGCGGGGTCCTCCTTCCTCGCAGAGACA
GGCCCAGAGGTTTACACGTTTTCTAAGCGTTTGATAATGTGAAGCTCCAGGCTGAGAGGA
TGCTTTGAGCACACTGCAGCTGTGTAACTTGGGGTGTATGTATGTAATATTTAAGGTTGA
AAGAAAATAAATCTCAAAAGCAAAGATATTAACTCTTATTAGAAAAAAAGACAAAATAAG
AAGCCAAAGCATGATGCGTCTTGTCCGCCTTACGCTGGCTCCACGCCTGAGCTGCCACGA
CCACGCAGCCGGCAGCAGCGAGGGAAGGATGGGGCCGGACCTCGGGCTGCAGCCTTGGGA
GCCCAGAGTCGGTGTCCTGTGCGAGGGACGGGACGTCCCGAGTGGCTGGTGGGACTGCGC
TTCCCGGTGCGCTGTTGACGTGGAGATGTGAATGCCTACTGCTTAAGATATCTGTATAAA
GTGCTGTGTGATTAAACTTTTTTTTTACTTGCATTTTTTTCGTTTGGCTCATTACAATGT |
|
84-285, gnl|bosTau2|chr19 (49276114-49276311) |
|
84-285, gnl|Hg17|chr17 (71898251-71898015) |
|
84-285, gnl|Mm7|chr11 (116647750-116647552) |
| |
|
305-485, gnl|bosTau2|chr19 (49276305-49276486) |
|
305-485, gnl|canFam2|chr9 (7308440-7307914) |
|
305-485, gnl|dasNov1|scaffold_109942 (3205-3698) |
|
305-485, gnl|echTel1|scaffold_200444 (4489-4172) |
|
305-485, gnl|hg17|chr17 (71897677-71898143) |
|
305-485, gnl|Hg17|chr17 (71898021-71897869) |
|
305-485, gnl|loxAfr1|scaffold_88594 (26202-25704) |
|
305-485, gnl|mm7|chr11 (116647225-116647654) |
|
305-485, gnl|Mm7|chr11 (116647558-116647407) |
|
305-485, gnl|monDom2|scaffold_18 (34673718-34674238) |
|
305-485, gnl|panTro1|chr19 (75262429-75262895) |
|
305-485, gnl|rheMac2|chr16 (71746565-71747031) |
|
305-485, gnl|rn3|chr10 (106661954-106662420) |
| |
|
594-1260, gnl|bosTau2|chr19 (49276524-49277202) |
|
594-1260, gnl|Hg17|chr17 (71897832-71897171) |
|
594-1260, gnl|Mm7|chr11 (116647400-116646759) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
84-285, gnl|bosTau2|chr19 (49276114-49276311) |
|
84-285, gnl|Hg17|chr17 (71898251-71898015) |
|
84-285, gnl|Mm7|chr11 (116647750-116647552) |
| |
|
305-485, gnl|bosTau2|chr19 (49276305-49276486) |
|
305-485, gnl|canFam2|chr9 (7308440-7307914) |
|
305-485, gnl|dasNov1|scaffold_109942 (3205-3698) |
|
305-485, gnl|echTel1|scaffold_200444 (4489-4172) |
|
305-485, gnl|hg17|chr17 (71897677-71898143) |
|
305-485, gnl|Hg17|chr17 (71898021-71897869) |
|
305-485, gnl|loxAfr1|scaffold_88594 (26202-25704) |
|
305-485, gnl|mm7|chr11 (116647225-116647654) |
|
305-485, gnl|Mm7|chr11 (116647558-116647407) |
|
305-485, gnl|monDom2|scaffold_18 (34673718-34674238) |
|
305-485, gnl|panTro1|chr19 (75262429-75262895) |
|
305-485, gnl|rheMac2|chr16 (71746565-71747031) |
|
305-485, gnl|rn3|chr10 (106661954-106662420) |
| |
|
594-1260, gnl|bosTau2|chr19 (49276524-49277202) |
|
594-1260, gnl|Hg17|chr17 (71897832-71897171) |
|
594-1260, gnl|Mm7|chr11 (116647400-116646759) |
|
che (0.68157) |
|
ece (0.45861) |
|
cmu (0.372787) |
|
fli (0.202881) |
|
fcc (0.197785) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
hyp (0.142837) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
spc (0.113366) |
|
nbm (0.0993246) |
|
che (0.68157) |
|
ece (0.45861) |
|
cmu (0.372787) |
|
fli (0.202881) |
|
fcc (0.197785) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
hyp (0.142837) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
spc (0.113366) |
|
nbm (0.0993246) |
