Ss1.1-recc2803c_i2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTAATTCTACCTCATGTACCTGCAATTCTCCAGTATCTCAGCAAAACCACAATAAGTGC AGAAAAGGTGAAAAAGAAGAAGAATAGAGCACAAGTCAGTAAGGAACTTGGCATTCTTTC AAAGATCAGCAAGTTTATGAAGGACAAAGAGCAAAGTTCTCTGCTCATCACGCTCCTCCT TCCTTTCCTCCACCATGGCAATGTCGCCCAGGATACAGAGGTTGATATTCTGGTGACAGT ACAGAACCTGTTACAACATTGTCTGGAGCCTACAAGCTTCCTCAGGCCTCTGGCAAAACT CTTCTCGGTTATTAAGAACAAGTTGTCAAGACAACTGCTTTGTACAGTTTTCCAGACCCT TTCTGATTTTGAGAGTGGATTGAAATACATTACTGATGTCGTCAAGCTTAACACCTTTGA TCAAAGACATCTTGACGATATCAACTTCGATGTTCGCTTCTCAGCATTTCAAACCATCAC CGCTTATGTGAAAGAGATGCAAACCGTGGATGTTAACTACCTAATTGCAGTTATGCATAA TTGTTTCTATAACATGGAGTTAGGAGACATGTCTTTAAGTGATAATGCGAGCATGTGCTT GATGAATATCATCAAAAAGCTTGCTGCCTTGAATGTCACAGAGAAAGAGTATAGAGAAAT CATTCATCGTTCACTCCTGGAGAAACTGAGGAAAGGACTGAAGAGCCAGACAGAGAGTGT TCAACAGGATTATACCACACTGCTTTCCTGTTTAATTCAGACCTTCCCAGAATCACCAGA ATTTAAAGACTTGGTACAGCTTACTGATTGTCATGACCCAGAAATGGACTTCTTTGAGAA TATGAAGCACAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTAATTCTACCTCATGTACCTGCAATTCTCCAGTATCTCAGCAAAACCACAATAAGTGC AGAAAAGGTGAAAAAGAAGAAGAATAGAGCACAAGTCAGTAAGGAACTTGGCATTCTTTC AAAGATCAGCAAGTTTATGAAGGACAAAGAGCAAAGTTCTCTGCTCATCACGCTCCTCCT TCCTTTCCTCCACCATGGCAATGTCGCCCAGGATACAGAGGTTGATATTCTGGTGACAGT ACAGAACCTGTTACAACATTGTCTGGAGCCTACAAGCTTCCTCAGGCCTCTGGCAAAACT CTTCTCGGTTATTAAGAACAAGTTGTCAAGACAACTGCTTTGTACAGTTTTCCAGACCCT TTCTGATTTTGAGAGTGGATTGAAATACATTACTGATGTCGTCAAGCTTAACACCTTTGA TCAAAGACATCTTGACGATATCAACTTCGATGTTCGCTTCTCAGCATTTCAAACCATCAC CGCTTATGTGAAAGAGATGCAAACCGTGGATGTTAACTACCTAATTGCAGTTATGCATAA TTGTTTCTATAACATGGAGTTAGGAGACATGTCTTTAAGTGATAATGCGAGCATGTGCTT GATGAATATCATCAAAAAGCTTGCTGCCTTGAATGTCACAGAGAAAGAGTATAGAGAAAT CATTCATCGTTCACTCCTGGAGAAACTGAGGAAAGGACTGAAGAGCCAGACAGAGAGTGT TCAACAGGATTATACCACACTGCTTTCCTGTTTAATTCAGACCTTCCCAGAATCACCAGA ATTTAAAGACTTGGTACAGCTTACTGATTGTCATGACCCAGAAATGGACTTCTTTGAGAA TATGAAGCACAT |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 1-124, gnl|bosTau2|chr5 (41701996-41701873) | |
| 1-124, gnl|Hg17|chr12 (100235081-100235204) | |
| 1-124, gnl|Mm7|chr10 (88336299-88336176) | |
| 210-355, gnl|bosTau2|chr5 (41699270-41699125) | |
| 210-355, gnl|canFam2|chr15 (43364617-43364774) | |
| 210-355, gnl|danRer3|chrUn (6701322-6701165) | |
| 210-355, gnl|dasNov1|scaffold_12364 (56873-57030) | |
| 210-355, gnl|fr1|chrUn (73323910-73323739) | |
| 210-355, gnl|galGal2|chr1 (44437197-44437355) | |
| 210-355, gnl|hg17|chr12 (100238691-100238848) | |
| 210-355, gnl|Hg17|chr12 (100238690-100238835) | |
| 210-355, gnl|loxAfr1|scaffold_215939 (683-840) | |
| 210-355, gnl|mm7|chr10 (88334127-88333966) | |
| 210-355, gnl|Mm7|chr10 (88334126-88333981) | |
| 210-355, gnl|oryCun1|scaffold_187415 (9940-10097) | |
| 210-355, gnl|panTro1|chr10 (102692166-102692323) | |
| 210-355, gnl|rheMac2|chr11 (102544407-102544564) | |
| 210-355, gnl|rn3|chr7 (25472902-25472747) | |
| 210-355, gnl|xenTro1|scaffold_230 (480934-480777) | |
| 396-564, gnl|bosTau2|chr5 (41698781-41698613) | |
| 396-564, gnl|canFam2|chr15 (43365106-43365275) | |
| 396-564, gnl|danRer3|chrUn (6700722-6700556) | |
| 396-564, gnl|dasNov1|scaffold_12364 (57367-57536) | |
| 396-564, gnl|fr1|chrUn (73323501-73323332) | |
| 396-564, gnl|galGal2|chr1 (44438142-44438310) | |
| 396-564, gnl|hg17|chr12 (100239176-100239345) | |
| 396-564, gnl|Hg17|chr12 (100239176-100239344) | |
| 396-564, gnl|mm7|chr10 (88333609-88333440) | |
| 396-564, gnl|Mm7|chr10 (88333607-88333439) | |
| 396-564, gnl|monDom2|scaffold_34 (11991115-11990946) | |
| 396-564, gnl|oryCun1|scaffold_187415 (10424-10593) | |
| 396-564, gnl|panTro1|chr10 (102692652-102692821) | |
| 396-564, gnl|rheMac2|chr11 (102544878-102545047) | |
| 396-564, gnl|rn3|chr7 (25472368-25472199) | |
| 396-564, gnl|tetNig1|chrUn_random (55211888-55211732) | |
| 396-564, gnl|xenTro1|scaffold_230 (479683-479474) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-124, gnl|bosTau2|chr5 (41701996-41701873) | |
| 1-124, gnl|Hg17|chr12 (100235081-100235204) | |
| 1-124, gnl|Mm7|chr10 (88336299-88336176) | |
| 210-355, gnl|bosTau2|chr5 (41699270-41699125) | |
| 210-355, gnl|canFam2|chr15 (43364617-43364774) | |
| 210-355, gnl|danRer3|chrUn (6701322-6701165) | |
| 210-355, gnl|dasNov1|scaffold_12364 (56873-57030) | |
| 210-355, gnl|fr1|chrUn (73323910-73323739) | |
| 210-355, gnl|galGal2|chr1 (44437197-44437355) | |
| 210-355, gnl|hg17|chr12 (100238691-100238848) | |
| 210-355, gnl|Hg17|chr12 (100238690-100238835) | |
| 210-355, gnl|loxAfr1|scaffold_215939 (683-840) | |
| 210-355, gnl|mm7|chr10 (88334127-88333966) | |
| 210-355, gnl|Mm7|chr10 (88334126-88333981) | |
| 210-355, gnl|oryCun1|scaffold_187415 (9940-10097) | |
| 210-355, gnl|panTro1|chr10 (102692166-102692323) | |
| 210-355, gnl|rheMac2|chr11 (102544407-102544564) | |
| 210-355, gnl|rn3|chr7 (25472902-25472747) | |
| 210-355, gnl|xenTro1|scaffold_230 (480934-480777) | |
| 396-564, gnl|bosTau2|chr5 (41698781-41698613) | |
| 396-564, gnl|canFam2|chr15 (43365106-43365275) | |
| 396-564, gnl|danRer3|chrUn (6700722-6700556) | |
| 396-564, gnl|dasNov1|scaffold_12364 (57367-57536) | |
| 396-564, gnl|fr1|chrUn (73323501-73323332) | |
| 396-564, gnl|galGal2|chr1 (44438142-44438310) | |
| 396-564, gnl|hg17|chr12 (100239176-100239345) | |
| 396-564, gnl|Hg17|chr12 (100239176-100239344) | |
| 396-564, gnl|mm7|chr10 (88333609-88333440) | |
| 396-564, gnl|Mm7|chr10 (88333607-88333439) | |
| 396-564, gnl|monDom2|scaffold_34 (11991115-11990946) | |
| 396-564, gnl|oryCun1|scaffold_187415 (10424-10593) | |
| 396-564, gnl|panTro1|chr10 (102692652-102692821) | |
| 396-564, gnl|rheMac2|chr11 (102544878-102545047) | |
| 396-564, gnl|rn3|chr7 (25472368-25472199) | |
| 396-564, gnl|tetNig1|chrUn_random (55211888-55211732) | |
| 396-564, gnl|xenTro1|scaffold_230 (479683-479474) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.115035) |