Non-Coding RNA Search

Ss1.1-recc2804c_a15.5

Sequence:


               
               GTTTAGAAAACGCTAAACCCTCCTCCCAGCAGCCTCCGTCACGATCCCTGATCACCTCAG
CATCAACCTCTCTCAACCCTCCACCCCTTCTTCTTCTTCTTCCTCCTCCACCACCACCCC
CTCGCTCGCCACAGCGGGGACCTCCGACGCACCCTCCAGCCTCCCCAACCCTCTTCCGAC
CGCCCCTTGTGTCTCCAGTCTGCTTGGCATGAAACCCATCCCTCTCCTGGCTCTAAATGT
TGTGTCTGCTGCTAAGGGTACCGGGGCTTCAGCTACCACCACCACCACCTCTGCCGTGCC
ATGTGTAACTAACAAACTGAAAAGCGAGAAACAGAGATTCTCTCCCTACTGACTGCATAT
TTTTGGGCACCCTGTCAAATATTTCTTGGTTTATTTTGTTTTTCTTTGTTAATATTGGTG
AGAATCAAACAATTGTGAGCTTGTGACAGTTTCCTTTTTACTATTTTGGGGGATAACAGG
GTGGGGGCAGGGGCAATGGTAACCTGTGTTTAGGTTTAGGCCATTTCAGCCGAGTGCCTG
AGTTTGTCTGACTTGTTGAATTCTTATCTAGAGCCATAGTTCTTGCTCTTCATTCTCATT
CTGTTACTTTTTGTAGCTTTATTCTGCCTTGCAATATAACAATGTGTTAGGCTCTGTGTT
ACTGAATAAAGGCTTCTCCGTTAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTAGAAAACGCTAAACCCTCCTCCCAGCAGCCTCCGTCACGATCCCTGATCACCTCAG
CATCAACCTCTCTCAACCCTCCACCCCTTCTTCTTCTTCTTCCTCCTCCACCACCACCCC
CTCGCTCGCCACAGCGGGGACCTCCGACGCACCCTCCAGCCTCCCCAACCCTCTTCCGAC
CGCCCCTTGTGTCTCCAGTCTGCTTGGCATGAAACCCATCCCTCTCCTGGCTCTAAATGT
TGTGTCTGCTGCTAAGGGTACCGGGGCTTCAGCTACCACCACCACCACCTCTGCCGTGCC
ATGTGTAACTAACAAACTGAAAAGCGAGAAACAGAGATTCTCTCCCTACTGACTGCATAT
TTTTGGGCACCCTGTCAAATATTTCTTGGTTTATTTTGTTTTTCTTTGTTAATATTGGTG
AGAATCAAACAATTGTGAGCTTGTGACAGTTTCCTTTTTACTATTTTGGGGGATAACAGG
GTGGGGGCAGGGGCAATGGTAACCTGTGTTTAGGTTTAGGCCATTTCAGCCGAGTGCCTG
AGTTTGTCTGACTTGTTGAATTCTTATCTAGAGCCATAGTTCTTGCTCTTCATTCTCATT
CTGTTACTTTTTGTAGCTTTATTCTGCCTTGCAATATAACAATGTGTTAGGCTCTGTGTT
ACTGAATAAAGGCTTCTCCGTTAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-684, gnl|bosTau2|chr5 (18975029-18974342)
               

               
               1-684, gnl|Hg17|chr12 (52154919-52155599)
               

               
               1-684, gnl|Mm7|chr15 (102479817-102480500)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-684, gnl|bosTau2|chr5 (18975029-18974342)
               

               
               1-684, gnl|Hg17|chr12 (52154919-52155599)
               

               
               1-684, gnl|Mm7|chr15 (102479817-102480500)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	1-684, gnl\|bosTau2\|chr5 (18975029-18974342)
	1-684, gnl\|Hg17\|chr12 (52154919-52155599)
	1-684, gnl\|Mm7\|chr15 (102479817-102480500)