Ss1.1-recc2804c_i5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCCACTTTCTCCTTCTTCTCTTTCTGGGTTTCTCTGCCACTCACACCCTCATGCCCTG ATTTTGCTTCTTTCTTTGTCTGCCCCTGGGTTTGGGGGGTTTGGATTTCACCTACCCCCA CCTCATCCGTTCCACCTCTTCCTCTTTCTCTCTCCCTTTCTTATTTCACCTCCCTGCCCC CGTCTCTGTTCCCTTCGCTATTCTCTTCTTTCTGGATCTCTATCCTCGTGTCTCTCTGGT GGAGGACGAGGAGGAGCTGTTTCAGGCCATCATGGAACAAACGGTCACCTACCCCAAGTC GCTGTCCCGCGAAGCTGTGGCCATCTGCAAGGGGTTCCTAACCAAGCACCCAGCAAAGCG CCTGGGCTCAGGGCCAGATGGAGAACCCACCATCAGAGCTCATGGCTTCTTCCGCTGGAT CGACTGGGAACGGCTGGAACGACTGGAGATCGCCCCTCCGTTCAGACCCCGTCCATGTGG CCGCAGCGGTGAGAACTTCGACAAGTTCTTCACGCGGGCGGCGCCAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCCACTTTCTCCTTCTTCTCTTTCTGGGTTTCTCTGCCACTCACACCCTCATGCCCTG ATTTTGCTTCTTTCTTTGTCTGCCCCTGGGTTTGGGGGGTTTGGATTTCACCTACCCCCA CCTCATCCGTTCCACCTCTTCCTCTTTCTCTCTCCCTTTCTTATTTCACCTCCCTGCCCC CGTCTCTGTTCCCTTCGCTATTCTCTTCTTTCTGGATCTCTATCCTCGTGTCTCTCTGGT GGAGGACGAGGAGGAGCTGTTTCAGGCCATCATGGAACAAACGGTCACCTACCCCAAGTC GCTGTCCCGCGAAGCTGTGGCCATCTGCAAGGGGTTCCTAACCAAGCACCCAGCAAAGCG CCTGGGCTCAGGGCCAGATGGAGAACCCACCATCAGAGCTCATGGCTTCTTCCGCTGGAT CGACTGGGAACGGCTGGAACGACTGGAGATCGCCCCTCCGTTCAGACCCCGTCCATGTGG CCGCAGCGGTGAGAACTTCGACAAGTTCTTCACGCGGGCGGCGCCAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 14-175, gnl|bosTau2|chr18 (52820374-52820217) | |
| 14-175, gnl|Hg17|chr19 (59100800-59101029) | |
| 334-474, gnl|bosTau2|chr18 (52820035-52819895) | |
| 334-474, gnl|canFam2|chr1 (106378283-106378153) | |
| 334-474, gnl|danRer3|chr1 (2415626-2415750) | |
| 334-474, gnl|dasNov1|scaffold_50247 (6046-6164) | |
| 334-474, gnl|echTel1|scaffold_311575 (165513-165383) | |
| 334-474, gnl|fr1|chrUn (270820464-270820340) | |
| 334-474, gnl|galGal2|chr14 (8758740-8758861) | |
| 334-474, gnl|hg17|chr19 (59101365-59101496) | |
| 334-474, gnl|Hg17|chr19 (59101382-59101522) | |
| 334-474, gnl|loxAfr1|scaffold_19670 (10170-10300) | |
| 334-474, gnl|Mm7|chr11 (108060648-108060508) | |
| 334-474, gnl|mm7|chr7 (118524954-118525068) | |
| 334-474, gnl|oryCun1|scaffold_190392 (174-301) | |
| 334-474, gnl|panTro1|chr20 (56518390-56518521) | |
| 334-474, gnl|rheMac2|chr19 (60008262-60008393) | |
| 334-474, gnl|rn3|chr1 (64225178-64225045) | |
| 334-474, gnl|tetNig1|chr8 (8304948-8304822) | |
| 334-474, gnl|xenTro1|scaffold_70 (1999276-1999394) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-175, gnl|bosTau2|chr18 (52820374-52820217) | |
| 14-175, gnl|Hg17|chr19 (59100800-59101029) | |
| 334-474, gnl|bosTau2|chr18 (52820035-52819895) | |
| 334-474, gnl|canFam2|chr1 (106378283-106378153) | |
| 334-474, gnl|danRer3|chr1 (2415626-2415750) | |
| 334-474, gnl|dasNov1|scaffold_50247 (6046-6164) | |
| 334-474, gnl|echTel1|scaffold_311575 (165513-165383) | |
| 334-474, gnl|fr1|chrUn (270820464-270820340) | |
| 334-474, gnl|galGal2|chr14 (8758740-8758861) | |
| 334-474, gnl|hg17|chr19 (59101365-59101496) | |
| 334-474, gnl|Hg17|chr19 (59101382-59101522) | |
| 334-474, gnl|loxAfr1|scaffold_19670 (10170-10300) | |
| 334-474, gnl|Mm7|chr11 (108060648-108060508) | |
| 334-474, gnl|mm7|chr7 (118524954-118525068) | |
| 334-474, gnl|oryCun1|scaffold_190392 (174-301) | |
| 334-474, gnl|panTro1|chr20 (56518390-56518521) | |
| 334-474, gnl|rheMac2|chr19 (60008262-60008393) | |
| 334-474, gnl|rn3|chr1 (64225178-64225045) | |
| 334-474, gnl|tetNig1|chr8 (8304948-8304822) | |
| 334-474, gnl|xenTro1|scaffold_70 (1999276-1999394) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) | |
| ecc (0.115035) |