Non-Coding RNA Search

Ss1.1-recc2804c_n5.5

Sequence:


               
               GGACCTGGAGGTGGGATTGCTTGGTTCTTTATCCTCAAGGTCACTCTTGTTTTGTTTGGG
GATTTTGTTTGTTTGTTTGTTTGGGGGCCTGGGGAATCCCAAATAGAAAACCTGACCTTT
TAGGGCTCTGAAGGAAAATCAGGTGACACCCCTCCATCAGCAGTGGCCCAGCAAGGAGGA
CGAGAGTCTTCAGCCGGTGTTTAAACATGGGTAGCCTTCTTCAGGATGCTCTCGAGGCCC
CATGACCTTGAATTCCCTACTTTCCAGAATCCAGGGGCTGCGACAGGGACTCTGGAAGGA
CAAAGACCAGCTGTTTTACACTAGTCACGTTTTCCACTGGCAGTGACTCCTTCACGGGGA
GAGGGCTCCAAAGGAACAATTGCCGTGCACATGAAAGGTACGCACCTCTCAGGCCTTTAG
AAGAACTTTCGTAATTCACACAAGCCCAGTCCCGAAGGTTCTGGAGACCTTCGGGAAGAA
CGTGTGGGGCTCCTCTGTGTTCGCGTCCGCTCCACTGCGGCTGGGACGAGGTCACGACCT
CAGGCTCCCTCGGGGAACCCATCTGAGGACAGGCCAGCACCTTCCCCGTTACACAGATTG
AGGGGACACTGGACTTTTTACCTGTTTTCTTGAATCGTCGATATTAATGTTGTGTTTACA
TTGATGAGAACAAGAGTCAGGGCCCTCCTCTCGGCCGGGCTGTTTGTATTGAGTCGCAGG
GTGACCAGCAGACGCTGCATTCAATAAACGAAAGTTCCGACTGTCAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACCTGGAGGTGGGATTGCTTGGTTCTTTATCCTCAAGGTCACTCTTGTTTTGTTTGGG
GATTTTGTTTGTTTGTTTGTTTGGGGGCCTGGGGAATCCCAAATAGAAAACCTGACCTTT
TAGGGCTCTGAAGGAAAATCAGGTGACACCCCTCCATCAGCAGTGGCCCAGCAAGGAGGA
CGAGAGTCTTCAGCCGGTGTTTAAACATGGGTAGCCTTCTTCAGGATGCTCTCGAGGCCC
CATGACCTTGAATTCCCTACTTTCCAGAATCCAGGGGCTGCGACAGGGACTCTGGAAGGA
CAAAGACCAGCTGTTTTACACTAGTCACGTTTTCCACTGGCAGTGACTCCTTCACGGGGA
GAGGGCTCCAAAGGAACAATTGCCGTGCACATGAAAGGTACGCACCTCTCAGGCCTTTAG
AAGAACTTTCGTAATTCACACAAGCCCAGTCCCGAAGGTTCTGGAGACCTTCGGGAAGAA
CGTGTGGGGCTCCTCTGTGTTCGCGTCCGCTCCACTGCGGCTGGGACGAGGTCACGACCT
CAGGCTCCCTCGGGGAACCCATCTGAGGACAGGCCAGCACCTTCCCCGTTACACAGATTG
AGGGGACACTGGACTTTTTACCTGTTTTCTTGAATCGTCGATATTAATGTTGTGTTTACA
TTGATGAGAACAAGAGTCAGGGCCCTCCTCTCGGCCGGGCTGTTTGTATTGAGTCGCAGG
GTGACCAGCAGACGCTGCATTCAATAAACGAAAGTTCCGACTGTCAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-763, gnl|bosTau2|chr5 (42693558-42694318)
               

               
               1-763, gnl|Hg17|chr22 (31994415-31993627)
               

               
               1-763, gnl|Mm7|chr8 (71339135-71338360)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-763, gnl|bosTau2|chr5 (42693558-42694318)
               

               
               1-763, gnl|Hg17|chr22 (31994415-31993627)
               

               
               1-763, gnl|Mm7|chr8 (71339135-71338360)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cli (0.152812)
               

               
               cag (0.151194)
               

               
               cov (0.132153)
               

               
               ecc (0.115035)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.152812)
               

               
               cag (0.151194)
               

               
               cov (0.132153)
               

               
               ecc (0.115035)

	1-763, gnl\|bosTau2\|chr5 (42693558-42694318)
	1-763, gnl\|Hg17\|chr22 (31994415-31993627)
	1-763, gnl\|Mm7\|chr8 (71339135-71338360)