Ss1.1-recc2805c_f22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAGTTTCTAATGTAGCAGCAGAGGATGTGTATAGAAAAAATATGTTTTAAGAAAATAGC TAAAAAAACCTAAAGTGGTAAAAGTATAAAAAGTTTAAAAATATATCTCAAGACCAAATA TTGCCAAAAACATGTACAACAATTTTAGAAACGTCGTCTATCTAACGCTGGACGAGGCCG GACACAGCTGGGGGCCCGTCCTCCTCCTCCTCGGAGCCGAAACAGGCCTCGGGGGACGCC CCCAGGGGCCGGCGGGACCACCTGCCCGCAGGAAGACTGCCCGGCCCGGGGGCGGGTGGG CCCCGAACCGCAGGGCTGGCCCAGGGCTGCAGGCACAGCGGGCACGCACACGGGTGCTCG GCTGTCTCCGGGGGCTGCGTGCCAACACCAGCGCTCGGCGGCCGCGGCTCAGGCCTCCAC CAGGATCTCCACCACGTGGTCCCGCTCGCCCAGGTCCGACTTGCAGCCGGGAGGGGCGGC GGCCGCGGGGCTCAAGGCCTCCAGGCCCTCGTGGGCCGCCGCGCCCGTCAGCACGGCGTC CAGGTCGTAGTAGGAGCCGTCCACGGCCGCAAAGAGCTCGTCCCCGGAGCCGGGGCTCCT GCGCTCCAGAGTTTCCAATATCTGATCCAGCGACGTCGGAACGCGCCCTCCGTCTCCGCG CGGGTCGGCGCCCTCGTCCCCGCCGCTCTTCGGGCCCCTTGGCGCCGGAGCCGTCGGGCG GGCACAGAGCTCAGAGGCCGCGGTCCCCGAGCGGCACAGGAGCTCCGTGGAGACCAGGCG CTCCAGCGGCGCCCGCCCCGCGGCCTGCGGCGCCACCGCCCCGCGCCAGCTCCCGTCCTG GCTCATCTCCTCCTGGATCTGGCGGACCGTGTTGGCGATGAGGACGGAGCGGCACAGGTT GGGCTCCACCAGCATGTGGCAGAGCTGGAGCTTGACCAGAGACATGTCCAGGAGCGACTG CCGCTGCAGGCCGTAGGCGGGCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAGTTTCTAATGTAGCAGCAGAGGATGTGTATAGAAAAAATATGTTTTAAGAAAATAGC TAAAAAAACCTAAAGTGGTAAAAGTATAAAAAGTTTAAAAATATATCTCAAGACCAAATA TTGCCAAAAACATGTACAACAATTTTAGAAACGTCGTCTATCTAACGCTGGACGAGGCCG GACACAGCTGGGGGCCCGTCCTCCTCCTCCTCGGAGCCGAAACAGGCCTCGGGGGACGCC CCCAGGGGCCGGCGGGACCACCTGCCCGCAGGAAGACTGCCCGGCCCGGGGGCGGGTGGG CCCCGAACCGCAGGGCTGGCCCAGGGCTGCAGGCACAGCGGGCACGCACACGGGTGCTCG GCTGTCTCCGGGGGCTGCGTGCCAACACCAGCGCTCGGCGGCCGCGGCTCAGGCCTCCAC CAGGATCTCCACCACGTGGTCCCGCTCGCCCAGGTCCGACTTGCAGCCGGGAGGGGCGGC GGCCGCGGGGCTCAAGGCCTCCAGGCCCTCGTGGGCCGCCGCGCCCGTCAGCACGGCGTC CAGGTCGTAGTAGGAGCCGTCCACGGCCGCAAAGAGCTCGTCCCCGGAGCCGGGGCTCCT GCGCTCCAGAGTTTCCAATATCTGATCCAGCGACGTCGGAACGCGCCCTCCGTCTCCGCG CGGGTCGGCGCCCTCGTCCCCGCCGCTCTTCGGGCCCCTTGGCGCCGGAGCCGTCGGGCG GGCACAGAGCTCAGAGGCCGCGGTCCCCGAGCGGCACAGGAGCTCCGTGGAGACCAGGCG CTCCAGCGGCGCCCGCCCCGCGGCCTGCGGCGCCACCGCCCCGCGCCAGCTCCCGTCCTG GCTCATCTCCTCCTGGATCTGGCGGACCGTGTTGGCGATGAGGACGGAGCGGCACAGGTT GGGCTCCACCAGCATGTGGCAGAGCTGGAGCTTGACCAGAGACATGTCCAGGAGCGACTG CCGCTGCAGGCCGTAGGCGGGCAC |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-669, gnl|bosTau2|chr21 (48741193-48740510) | |
| 1-669, gnl|Hg17|chr14 (104548099-104548867) | |
| 1-669, gnl|Mm7|chr12 (110345990-110346619) | |
| 747-982, gnl|bosTau2|chr21 (48740399-48740167) | |
| 747-982, gnl|canFam2|chr8 (75507268-75507024) | |
| 747-982, gnl|danRer3|chr20 (40435202-40434954) | |
| 747-982, gnl|dasNov1|scaffold_168269 (386-621) | |
| 747-982, gnl|echTel1|scaffold_236409 (5599-5833) | |
| 747-982, gnl|fr1|chrUn (163240474-163240226) | |
| 747-982, gnl|galGal2|chr5 (48722985-48722741) | |
| 747-982, gnl|Hg17|chr14 (104548999-104549252) | |
| 747-982, gnl|hg17|chr9 (14583644-14583887) | |
| 747-982, gnl|loxAfr1|scaffold_56868 (4184-3942) | |
| 747-982, gnl|mm7|chr12 (110346997-110346753) | |
| 747-982, gnl|Mm7|chr12 (110346751-110346983) | |
| 747-982, gnl|monDom2|scaffold_6 (105459073-105459317) | |
| 747-982, gnl|oryCun1|scaffold_95084 (5248-5019) | |
| 747-982, gnl|panTro1|chr11 (14808181-14808424) | |
| 747-982, gnl|rheMac2|chr15 (62316568-62316325) | |
| 747-982, gnl|rn3|chr6 (137826975-137826731) | |
| 747-982, gnl|tetNig1|chr10 (12376936-12377184) | |
| 747-982, gnl|xenTro1|scaffold_421 (1022061-1022298) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-669, gnl|bosTau2|chr21 (48741193-48740510) | |
| 1-669, gnl|Hg17|chr14 (104548099-104548867) | |
| 1-669, gnl|Mm7|chr12 (110345990-110346619) | |
| 747-982, gnl|bosTau2|chr21 (48740399-48740167) | |
| 747-982, gnl|canFam2|chr8 (75507268-75507024) | |
| 747-982, gnl|danRer3|chr20 (40435202-40434954) | |
| 747-982, gnl|dasNov1|scaffold_168269 (386-621) | |
| 747-982, gnl|echTel1|scaffold_236409 (5599-5833) | |
| 747-982, gnl|fr1|chrUn (163240474-163240226) | |
| 747-982, gnl|galGal2|chr5 (48722985-48722741) | |
| 747-982, gnl|Hg17|chr14 (104548999-104549252) | |
| 747-982, gnl|hg17|chr9 (14583644-14583887) | |
| 747-982, gnl|loxAfr1|scaffold_56868 (4184-3942) | |
| 747-982, gnl|mm7|chr12 (110346997-110346753) | |
| 747-982, gnl|Mm7|chr12 (110346751-110346983) | |
| 747-982, gnl|monDom2|scaffold_6 (105459073-105459317) | |
| 747-982, gnl|oryCun1|scaffold_95084 (5248-5019) | |
| 747-982, gnl|panTro1|chr11 (14808181-14808424) | |
| 747-982, gnl|rheMac2|chr15 (62316568-62316325) | |
| 747-982, gnl|rn3|chr6 (137826975-137826731) | |
| 747-982, gnl|tetNig1|chr10 (12376936-12377184) | |
| 747-982, gnl|xenTro1|scaffold_421 (1022061-1022298) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| ese (0.253004) | |
| fli (0.202881) | |
| pty (0.142714) | |
| pla (0.133672) | |
| eru (0.120048) | |
| ecc (0.115035) | |
| eje (0.0988338) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.253004) | |
| fli (0.202881) | |
| pty (0.142714) | |
| pla (0.133672) | |
| eru (0.120048) | |
| ecc (0.115035) | |
| eje (0.0988338) |