Non-Coding RNA Search

Ss1.1-recc2806c_d6.5

Sequence:


               
               CATAGGTTGGAAAGGTTACATGTTTGCCAAGGCCTAAGGATTTCCTTCTGCTAAGGAGAG
GTTTGATTGAGTATCTGGAATGTGGATTTGGAGAGTAAGAAGATTGGTTCTTGCTTGTGC
CATCAGCTAAATGACAGTGAAGACTAACTGCCCATCTGCCTCCATTTCCATCTCTTACCT
GCGTTAACGCCTGCCAGCTATGCACCACAAAAGCTTGCTAGGAATATTATTGAATCAATG
CCTATAAAAGCTATATGTAAACAAGAACAAAAACGTAAATGCTTGTTTTGTGTTACTGCT
TAATAATCCGTATGCTTTAGACATCGTCCCAGTTGCTGGGCATAGTCCTAAGGGGGGAGT
TTCCTGTGGAGAGGACCTTCTGCAGTTCAGTGCAGAGAGATTGAAAAATACATGCAGGTT
CTTCCACTCTATAGACGGCTCACCCAGTTTGTTTCTGTAGCACAGGGACGGGCCCAGCTT
ATCAGGGGTCTCACATGGTATAGACATAGCATACTATCACAAATACCGTACTCACAAGAA
GAAGCCCATAAACATACTTATGAAGAGCAGGGATTGCTTTCCTAATTTAATAAGCGAAAT
CTGTCATTTACAAACCCATAAATCTCCTGGAAGCCAAGGCCACTTCTTACACATTTTGTT
TCTAACACATATTCCCAGATTATGCAATCTTATTTTAATAAAAAGGTAGTATGATGGAAT
GCTTAAGAGAGTCATTGACTTTGGAAATAGAACCAGCTTCAAATTCCAACTCTGCAGCTT
ATCAGCAACAGTACATAGATGATGGGCAAGTCAATCAACCTCTGTAAGTTGATGTCAAAT
AAGGATAATAGTTCCCACCTTGGAGCTCCCGTCGTGGCTCAGTGGCTAACGAATCCGACT
AGGAACCATGAGGTTGCGGGTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATAGGTTGGAAAGGTTACATGTTTGCCAAGGCCTAAGGATTTCCTTCTGCTAAGGAGAG
GTTTGATTGAGTATCTGGAATGTGGATTTGGAGAGTAAGAAGATTGGTTCTTGCTTGTGC
CATCAGCTAAATGACAGTGAAGACTAACTGCCCATCTGCCTCCATTTCCATCTCTTACCT
GCGTTAACGCCTGCCAGCTATGCACCACAAAAGCTTGCTAGGAATATTATTGAATCAATG
CCTATAAAAGCTATATGTAAACAAGAACAAAAACGTAAATGCTTGTTTTGTGTTACTGCT
TAATAATCCGTATGCTTTAGACATCGTCCCAGTTGCTGGGCATAGTCCTAAGGGGGGAGT
TTCCTGTGGAGAGGACCTTCTGCAGTTCAGTGCAGAGAGATTGAAAAATACATGCAGGTT
CTTCCACTCTATAGACGGCTCACCCAGTTTGTTTCTGTAGCACAGGGACGGGCCCAGCTT
ATCAGGGGTCTCACATGGTATAGACATAGCATACTATCACAAATACCGTACTCACAAGAA
GAAGCCCATAAACATACTTATGAAGAGCAGGGATTGCTTTCCTAATTTAATAAGCGAAAT
CTGTCATTTACAAACCCATAAATCTCCTGGAAGCCAAGGCCACTTCTTACACATTTTGTT
TCTAACACATATTCCCAGATTATGCAATCTTATTTTAATAAAAAGGTAGTATGATGGAAT
GCTTAAGAGAGTCATTGACTTTGGAAATAGAACCAGCTTCAAATTCCAACTCTGCAGCTT
ATCAGCAACAGTACATAGATGATGGGCAAGTCAATCAACCTCTGTAAGTTGATGTCAAAT
AAGGATAATAGTTCCCACCTTGGAGCTCCCGTCGTGGCTCAGTGGCTAACGAATCCGACT
AGGAACCATGAGGTTGCGGGTTCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-268, gnl|bosTau2|chr25 (34870833-34870568)
               

               
               1-268, gnl|Hg17|chr7 (98564036-98563810)
               


               
               488-857, gnl|bosTau2|chr25 (34869861-34869475)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-268, gnl|bosTau2|chr25 (34870833-34870568)
               

               
               1-268, gnl|Hg17|chr7 (98564036-98563810)
               


               
               488-857, gnl|bosTau2|chr25 (34869861-34869475)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               che (0.136314)
               

               
               thg (0.126791)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               thg (0.126791)
               

               
               ecc (0.115035)

	1-268, gnl\|bosTau2\|chr25 (34870833-34870568)
	1-268, gnl\|Hg17\|chr7 (98564036-98563810)

	488-857, gnl\|bosTau2\|chr25 (34869861-34869475)