Non-Coding RNA Search

Ss1.1-recc2807c_b10.5

Sequence:


               
               TTCCAGCCGAAGCCATTTTGCACCCTACCCGGTCGCCTCCAGGACCCACTGGGAAGGTCT
CGCGAGGGCGGAAACGTCGTGTCAGAAACGGCAGAGCACCCGTGGTGTGTGGTGTTTGGG
TGGCCCTGGCCTCGCCACGGGTCCCATCTTCCGAGTGGTCCCTAAGCCTTTGCCGTGAGC
ATGTGCACTGAGAATGGTAGTGGTTGGGTGGGCTGTACGTGGAGGGTCTCCCACGGACTG
TGTGATGGGGCGAGTCCTTTCCCTTGCGAGGCTGCAAGAGAGACAAAAGCGTCGTTTGAA
TGTTTTGTGTGTGAGGCGTGTTCCCTGAGATGAGGAGTTGACCACCAATCATTTCCTGGG
GGAGGGGGGGGGGTGTCTGCGCCTTAGAGGGAAAAATAGAAAAAGAAAAAAAGAAGGGGA
GCTGTGGAGGGACGAGTGGGCGGGCAGGACCCCCGAGTGGCGAGTGGGTGTGGGGAGGGC
CCCCCCCGCGAGGCGGGAGAACTTGGGTGTCCAGCTACGACACGTGCCATGTGTGAAGTG
AGTAGCATCTGCTCCTCGCTGCGACAGAGTTCATTCGTTACCCGTTGTATAAGCTGTGTA
TCTACAAATATAACACATTGATAACTTTTCCTTATAAGACAAGAGTAATGCATGGTCTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCAGCCGAAGCCATTTTGCACCCTACCCGGTCGCCTCCAGGACCCACTGGGAAGGTCT
CGCGAGGGCGGAAACGTCGTGTCAGAAACGGCAGAGCACCCGTGGTGTGTGGTGTTTGGG
TGGCCCTGGCCTCGCCACGGGTCCCATCTTCCGAGTGGTCCCTAAGCCTTTGCCGTGAGC
ATGTGCACTGAGAATGGTAGTGGTTGGGTGGGCTGTACGTGGAGGGTCTCCCACGGACTG
TGTGATGGGGCGAGTCCTTTCCCTTGCGAGGCTGCAAGAGAGACAAAAGCGTCGTTTGAA
TGTTTTGTGTGTGAGGCGTGTTCCCTGAGATGAGGAGTTGACCACCAATCATTTCCTGGG
GGAGGGGGGGGGGTGTCTGCGCCTTAGAGGGAAAAATAGAAAAAGAAAAAAAGAAGGGGA
GCTGTGGAGGGACGAGTGGGCGGGCAGGACCCCCGAGTGGCGAGTGGGTGTGGGGAGGGC
CCCCCCCGCGAGGCGGGAGAACTTGGGTGTCCAGCTACGACACGTGCCATGTGTGAAGTG
AGTAGCATCTGCTCCTCGCTGCGACAGAGTTCATTCGTTACCCGTTGTATAAGCTGTGTA
TCTACAAATATAACACATTGATAACTTTTCCTTATAAGACAAGAGTAATGCATGGTCTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-660, gnl|bosTau2|chr13 (29622479-29621822)
               

               
               1-660, gnl|Hg17|chr10 (3811656-3810947)
               

               
               1-660, gnl|Mm7|chr13 (5752373-5753098)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-660, gnl|bosTau2|chr13 (29622479-29621822)
               

               
               1-660, gnl|Hg17|chr10 (3811656-3810947)
               

               
               1-660, gnl|Mm7|chr13 (5752373-5753098)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nep (0.183925)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               ecc (0.115035)

	1-660, gnl\|bosTau2\|chr13 (29622479-29621822)
	1-660, gnl\|Hg17\|chr10 (3811656-3810947)
	1-660, gnl\|Mm7\|chr13 (5752373-5753098)