Non-Coding RNA Search

Ss1.1-recc2807c_i13.5

Sequence:


               
               GCAGCACAGTCCCTGGCAGAGCCAGAGCCTCTCCGCGCAGCCCAGCCCGAGCGCCGCGCG
TCGCCGCCACTGCAGCTCGCGGCCCCTTCGTCTCCGCCCGCCTTTCCTGTGGCTGATTTG
CCTTAAACTCCCTAAAATTTCCGCAGCCCCGGATCCTGCTGCGGCCGGTCTCTAATTAAT
AGAAGATGGCAAAGCCCAGCCACAGCAGCTACGTCCTTCAGCAGCTAAACAACCAAAGGG
AATGGGGTTTTCTCTGTGACTGTTGTATCGCAATTGATGACATTTACTTTCAAGCACACA
AAGCAGTTCTAGCTGCCTGTAGCTCCTATTTTAGAATGTTTTTCATGAACCATCAGCATA
GTACTGCACAACTGAATCTCAGCAACATGAAAATTAGTGCCGAGTGTTTTGATCTCATTT
GGCAGTTTATGTATTTAGGAAAAN

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCACAGTCCCTGGCAGAGCCAGAGCCTCTCCGCGCAGCCCAGCCCGAGCGCCGCGCG
TCGCCGCCACTGCAGCTCGCGGCCCCTTCGTCTCCGCCCGCCTTTCCTGTGGCTGATTTG
CCTTAAACTCCCTAAAATTTCCGCAGCCCCGGATCCTGCTGCGGCCGGTCTCTAATTAAT
AGAAGATGGCAAAGCCCAGCCACAGCAGCTACGTCCTTCAGCAGCTAAACAACCAAAGGG
AATGGGGTTTTCTCTGTGACTGTTGTATCGCAATTGATGACATTTACTTTCAAGCACACA
AAGCAGTTCTAGCTGCCTGTAGCTCCTATTTTAGAATGTTTTTCATGAACCATCAGCATA
GTACTGCACAACTGAATCTCAGCAACATGAAAATTAGTGCCGAGTGTTTTGATCTCATTT
GGCAGTTTATGTATTTAGGAAAAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-169, gnl|bosTau2|chr10 (51602976-51602808)
               

               
               1-169, gnl|Hg17|chr14 (64041244-64041419)
               

               
               1-169, gnl|Mm7|chr12 (74328753-74328918)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-169, gnl|bosTau2|chr10 (51602976-51602808)
               

               
               1-169, gnl|Hg17|chr14 (64041244-64041419)
               

               
               1-169, gnl|Mm7|chr12 (74328753-74328918)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	1-169, gnl\|bosTau2\|chr10 (51602976-51602808)
	1-169, gnl\|Hg17\|chr14 (64041244-64041419)
	1-169, gnl\|Mm7\|chr12 (74328753-74328918)