Non-Coding RNA Search

Ss1.1-recc2809c_a9.5

Sequence:


               
               CGGGAGCAGGCCCGCAGCAGCACCTTGGTCCCCTGCTCCCGCGACATGGCTTTCAACTTT
GCGGCTCCCTCGGGCAGCTCAGGTACCGCTGCAGCCACCGCAGCCCCCGCGGGTGGGTTT
GGAGGATTTGGGACAACATCTACAACAGCAGGCTCTGCATTCAGCTTTTCAGCTCCAGCT
AACACTGGCACTACTGGACTCTTTGGTAGTACTCAGAACAAAGGTTTTGGATTTGGTACT
GGTTTTGGCACAACAACTGGAACTAGTACTGGTTTAGGTACTGGTTTGGGAACTGGACTT
GGATTTGGAGGATTTAATACACAGCAGCAGCAGCAACAACAACAAACTACATTAGGTGGT
CTCTTCAGTCAGCCTACACAAGCTCCTACCCAGTCCAATCAACTGATAAATACTGCAAGT
GCTCTTTCTGCTCCAACACTACTGGGAGATGAGAGAGATGCTATTTTGGCGAAATGGAAT
CAACTACAGGCCTTTTGGGGAACAGGAAAAGGATATTTCAACAATAACATTCCACCAGTG
GAATTCACGCAAGAAAATCCTTTTTGCCGATTTAAGGCAGTAGGTTACAGTTGTATGCCC
AATAATAAAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGAGCAGGCCCGCAGCAGCACCTTGGTCCCCTGCTCCCGCGACATGGCTTTCAACTTT
GCGGCTCCCTCGGGCAGCTCAGGTACCGCTGCAGCCACCGCAGCCCCCGCGGGTGGGTTT
GGAGGATTTGGGACAACATCTACAACAGCAGGCTCTGCATTCAGCTTTTCAGCTCCAGCT
AACACTGGCACTACTGGACTCTTTGGTAGTACTCAGAACAAAGGTTTTGGATTTGGTACT
GGTTTTGGCACAACAACTGGAACTAGTACTGGTTTAGGTACTGGTTTGGGAACTGGACTT
GGATTTGGAGGATTTAATACACAGCAGCAGCAGCAACAACAACAAACTACATTAGGTGGT
CTCTTCAGTCAGCCTACACAAGCTCCTACCCAGTCCAATCAACTGATAAATACTGCAAGT
GCTCTTTCTGCTCCAACACTACTGGGAGATGAGAGAGATGCTATTTTGGCGAAATGGAAT
CAACTACAGGCCTTTTGGGGAACAGGAAAAGGATATTTCAACAATAACATTCCACCAGTG
GAATTCACGCAAGAAAATCCTTTTTGCCGATTTAAGGCAGTAGGTTACAGTTGTATGCCC
AATAATAAAGAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q16861_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q16861_HUMAN

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               91-611, gnl|bosTau2|chr26 (26167163-26167680)
               

               
               91-611, gnl|Hg17|chr4 (77426411-77412660)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               91-611, gnl|bosTau2|chr26 (26167163-26167680)
               

               
               91-611, gnl|Hg17|chr4 (77426411-77412660)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               eru (0.240096)
               

               
               ecc (0.23007)
               

               
               nco (0.161734)
               

               
               ste (0.135208)
               

               
               cty (0.10408)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.240096)
               

               
               ecc (0.23007)
               

               
               nco (0.161734)
               

               
               ste (0.135208)
               

               
               cty (0.10408)

	91-611, gnl\|bosTau2\|chr26 (26167163-26167680)
	91-611, gnl\|Hg17\|chr4 (77426411-77412660)

	eru (0.240096)
	ecc (0.23007)
	nco (0.161734)
	ste (0.135208)
	cty (0.10408)