Non-Coding RNA Search

Ss1.1-recc2809c_l20.5

Sequence:


               
               TTTCACTCTTGTCTTTAATCCAGCTTCCACATAGCTGCCTAAGGTGTAACTCAGAGCATG
CCTGTTTCTCTCTGAAACCCTCCAGCAGCTTCCCACTGTGCTGAGAATCACCCCTGTGCT
CCCCACCGTGGCCTGCAGGGCCTCTCACCATCTGGCTCTGGGCTCCCTCCCTCATCTGGT
TCCAGCCACAGTGGTGTCCAGCCCCTCAGATTTGCCAAGCTCATTCCTGCCTAAGCAATC
CTTTGTTTTGCTTACAAGTTCTTCCTCCTTGTGTCCTCCTGGTGGATTCCCTCTCATTTT
TTTAGGACTCAGCTTCAAGGTCTTTTCCTGAGTGTAAGCTCCCTTTCCTGATCACTTTTT
CTAAAGCCAGTTCTTCCTCATTAGTTTAAAATTCAGCTCCCTACTTATTTTTTGGTTCCC
ATAGAGACATTTACCACAATGTAACATTAAGTCATGCAATAGTCACAAAATGGAATACCA
TACAACTGTAAAAAGAAATCTATGTATGGATATAGAACAATTTAAGATATGGTTCAGTGA
AAAAAAAAATCCCAAGGTGAAGTCCAGAGTGTATAGAATACCACCATTTGTATAATAGAG
GGGGAAGAATATATTGGCTTGTATATGCATATGTTATCTCTGGATGGGCACAGAAGAAAC
TGATAACATTGCTGGCCTTTATGAGGAGGACTAGGTGGCTAGGGGCAGGAGTGGGGGGCT
TTTCACTGTGCACCTTTTGGTATTTGGAATCATATAGTGTACCACCTATGAAAAATAAAT
AAGTAAATATTTAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCACTCTTGTCTTTAATCCAGCTTCCACATAGCTGCCTAAGGTGTAACTCAGAGCATG
CCTGTTTCTCTCTGAAACCCTCCAGCAGCTTCCCACTGTGCTGAGAATCACCCCTGTGCT
CCCCACCGTGGCCTGCAGGGCCTCTCACCATCTGGCTCTGGGCTCCCTCCCTCATCTGGT
TCCAGCCACAGTGGTGTCCAGCCCCTCAGATTTGCCAAGCTCATTCCTGCCTAAGCAATC
CTTTGTTTTGCTTACAAGTTCTTCCTCCTTGTGTCCTCCTGGTGGATTCCCTCTCATTTT
TTTAGGACTCAGCTTCAAGGTCTTTTCCTGAGTGTAAGCTCCCTTTCCTGATCACTTTTT
CTAAAGCCAGTTCTTCCTCATTAGTTTAAAATTCAGCTCCCTACTTATTTTTTGGTTCCC
ATAGAGACATTTACCACAATGTAACATTAAGTCATGCAATAGTCACAAAATGGAATACCA
TACAACTGTAAAAAGAAATCTATGTATGGATATAGAACAATTTAAGATATGGTTCAGTGA
AAAAAAAAATCCCAAGGTGAAGTCCAGAGTGTATAGAATACCACCATTTGTATAATAGAG
GGGGAAGAATATATTGGCTTGTATATGCATATGTTATCTCTGGATGGGCACAGAAGAAAC
TGATAACATTGCTGGCCTTTATGAGGAGGACTAGGTGGCTAGGGGCAGGAGTGGGGGGCT
TTTCACTGTGCACCTTTTGGTATTTGGAATCATATAGTGTACCACCTATGAAAAATAAAT
AAGTAAATATTTAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               3-795, gnl|bosTau2|chr2 (76927638-76928428)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-795, gnl|bosTau2|chr2 (76927638-76928428)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               fce (0.271592)
               

               
               ecc (0.23007)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               ecc (0.23007)
               

               
               ebs (0.118301)