Non-Coding RNA Search

Ss1.1-recc2810c_c11.5

Sequence:


               
               TTAGACAGTATCACCGTTTTGACTTTTATTTGACAGCAAGCTGTTCTTCAGACATTAGGA
TTTTCCAATGACCCTGTGACCACACCTGCTGCCCTGTGCTCGCCTGTCCACTGGTCCCTG
GATGCCCTGGGGCACCCTCCCCTACAGGTGGCCCTCTGGTTACTATCTGTCTACATATAC
GCATCCACATGCGTGCTCCCCCCTCAGAAACCAGCCCCACACCGGAACCCTGGACGCCTG
CCGTTCCTGGGGTGACTGCGGCATCCGGGCACCGTCTCTGTGAGCAGTGTTCCAGTGTGT
GTAGATCAAGTGCAACGTAGTCTAGTTCCGCTCAGCAAGCTCAGTGTTCACCGACGTCAT
TTTGTCTGGAAGTCTCTTTCTCTGGCCCAGGCCTCGAAGAATACACTGTGACTTAAGAAG
CCTTACCATGCAGTAACTAAGCTTTAGGATCACTGGACCTGAGGGTGACCTGTGTGTTGC
ATGCAGCCGACCTTAGGAAGACTCGCTAATACCACTAATAAACCTGAGGTCATGACGGAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAGACAGTATCACCGTTTTGACTTTTATTTGACAGCAAGCTGTTCTTCAGACATTAGGA
TTTTCCAATGACCCTGTGACCACACCTGCTGCCCTGTGCTCGCCTGTCCACTGGTCCCTG
GATGCCCTGGGGCACCCTCCCCTACAGGTGGCCCTCTGGTTACTATCTGTCTACATATAC
GCATCCACATGCGTGCTCCCCCCTCAGAAACCAGCCCCACACCGGAACCCTGGACGCCTG
CCGTTCCTGGGGTGACTGCGGCATCCGGGCACCGTCTCTGTGAGCAGTGTTCCAGTGTGT
GTAGATCAAGTGCAACGTAGTCTAGTTCCGCTCAGCAAGCTCAGTGTTCACCGACGTCAT
TTTGTCTGGAAGTCTCTTTCTCTGGCCCAGGCCTCGAAGAATACACTGTGACTTAAGAAG
CCTTACCATGCAGTAACTAAGCTTTAGGATCACTGGACCTGAGGGTGACCTGTGTGTTGC
ATGCAGCCGACCTTAGGAAGACTCGCTAATACCACTAATAAACCTGAGGTCATGACGGAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-541, gnl|bosTau2|chr21 (839579-839053)
               

               
               1-541, gnl|Hg17|chr15 (27197221-27197810)
               

               
               1-541, gnl|Mm7|chr7 (60611858-60612549)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-541, gnl|bosTau2|chr21 (839579-839053)
               

               
               1-541, gnl|Hg17|chr15 (27197221-27197810)
               

               
               1-541, gnl|Mm7|chr7 (60611858-60612549)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	1-541, gnl\|bosTau2\|chr21 (839579-839053)
	1-541, gnl\|Hg17\|chr15 (27197221-27197810)
	1-541, gnl\|Mm7\|chr7 (60611858-60612549)