Non-Coding RNA Search

Ss1.1-recc2810c_k5.5

Sequence:


               
               CGGGACCTGCTTTGGATGCGCAAGTCGGCAGAAGCAAACACACATTCTACCACATGGTCA
CGTGAAATCTGTGCTGACCAAAAGCCTAGGGCAGAGGAGAGGGGACTGCTGCGCGGCCTT
AAGACTAACCCCGAGGCCGAGGCGTTCCCATTGCGGCTCAGCGGGCTGAGAGATGACGTT
CAGAGCCATGGCCTGGAGCTGTGTGGCAGACACTGAAATCCCCACCAGGTGGAAGACATT
AACTGCATGCTGCCCACCTGCATGGAGATCCCGGACCCACTGGAACCAGAAGGCAAGACA
TCTAGTGCAACGTTTTAAAGTGGAAGCTCACAGCGTTGGGGGGAATGTCAATGGCTGGAA
CCCTGTGGGGAACAGTATGAAGGCTCCTTAAAAAGCAAAATGTAGAACCACCATACGATC
CAGCCATCCCACTCCTGGGCATCTATCCAGAGAAAAGCATCATTTGAAAAGATGCCTGCA
GCCCTTTTTCATAGCAGCACTGCTCACAATAGCCAAGACATGGAATCAGCCTAAATGTCC
ATCGACAGAGGAGTGGATAAAGAA------------TGGGATGCTGCTGTGTAGCCCTGG
GAACTGTGTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGACCTGCTTTGGATGCGCAAGTCGGCAGAAGCAAACACACATTCTACCACATGGTCA
CGTGAAATCTGTGCTGACCAAAAGCCTAGGGCAGAGGAGAGGGGACTGCTGCGCGGCCTT
AAGACTAACCCCGAGGCCGAGGCGTTCCCATTGCGGCTCAGCGGGCTGAGAGATGACGTT
CAGAGCCATGGCCTGGAGCTGTGTGGCAGACACTGAAATCCCCACCAGGTGGAAGACATT
AACTGCATGCTGCCCACCTGCATGGAGATCCCGGACCCACTGGAACCAGAAGGCAAGACA
TCTAGTGCAACGTTTTAAAGTGGAAGCTCACAGCGTTGGGGGGAATGTCAATGGCTGGAA
CCCTGTGGGGAACAGTATGAAGGCTCCTTAAAAAGCAAAATGTAGAACCACCATACGATC
CAGCCATCCCACTCCTGGGCATCTATCCAGAGAAAAGCATCATTTGAAAAGATGCCTGCA
GCCCTTTTTCATAGCAGCACTGCTCACAATAGCCAAGACATGGAATCAGCCTAAATGTCC
ATCGACAGAGGAGTGGATAAAGAA------------TGGGATGCTGCTGTGTAGCCCTGG
GAACTGTGTCTC

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               317-564, gnl|bosTau2|chr10 (46195248-46195497)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               317-564, gnl|bosTau2|chr10 (46195248-46195497)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               ecc (0.115035)