Non-Coding RNA Search

Ss1.1-recc2811c_e14.5

Sequence:


               
               GGGGGACAGCTGGGAGCCGAGGGAAAGCACAGGTGCTGAGGCGCATGCTCAGCAGCTGCG
CAGCAGCTGCACTGGTGGCCAGGCTGGTTCGCCCCTCCCGTCCCTGACCTGCAGCCACGG
GTGGCGGGCTTGCCTCCCCTCCACCGGAGCCTCCACGAGTCCAGGCGGCATCCAGAGCGA
ACACTCGGTCCCCACTGTTAGCAATCACGCCATGTGTCGCCCCTGAGCAGGAGTCGTCCA
ACCTCGGGCAAAGGCCTTTCAGTTAGAACAGCAAATCCCACTTCAAATGCCAGCTACAGA
TAACTTAAAGCCATCCCTTTTTTCCAAAGGGCACGTCGAGAATGTTACCCATTTGTAAAT
TGTTCCCTAATGTCCTTGTTTAAACAACAACAAACAGGGCAACTCAATTCGTCGAGGGTC
TGTGAGGTCTTAAGCAAGACCTCAGATCGGAGATGTTGGAATCGAAGAAGATAAGCCGCA
TAACGCTGCGCTCACGGGCTTCTTTCCATCTTCTGTTGTAGACACATTGGTAGAACAAGG
GGTCGACATATATTACAAAGCCTCACTGCTGCTGTACCAAGTCGCTCCTGTACACGGCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGGACAGCTGGGAGCCGAGGGAAAGCACAGGTGCTGAGGCGCATGCTCAGCAGCTGCG
CAGCAGCTGCACTGGTGGCCAGGCTGGTTCGCCCCTCCCGTCCCTGACCTGCAGCCACGG
GTGGCGGGCTTGCCTCCCCTCCACCGGAGCCTCCACGAGTCCAGGCGGCATCCAGAGCGA
ACACTCGGTCCCCACTGTTAGCAATCACGCCATGTGTCGCCCCTGAGCAGGAGTCGTCCA
ACCTCGGGCAAAGGCCTTTCAGTTAGAACAGCAAATCCCACTTCAAATGCCAGCTACAGA
TAACTTAAAGCCATCCCTTTTTTCCAAAGGGCACGTCGAGAATGTTACCCATTTGTAAAT
TGTTCCCTAATGTCCTTGTTTAAACAACAACAAACAGGGCAACTCAATTCGTCGAGGGTC
TGTGAGGTCTTAAGCAAGACCTCAGATCGGAGATGTTGGAATCGAAGAAGATAAGCCGCA
TAACGCTGCGCTCACGGGCTTCTTTCCATCTTCTGTTGTAGACACATTGGTAGAACAAGG
GGTCGACATATATTACAAAGCCTCACTGCTGCTGTACCAAGTCGCTCCTGTACACGGCGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               60-599, gnl|bosTau2|chrX (13688706-13688171)
               

               
               60-599, gnl|Hg17|chrX (152368380-152368883)
               

               
               60-599, gnl|Mm7|chrX (68959060-68959583)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-599, gnl|bosTau2|chrX (13688706-13688171)
               

               
               60-599, gnl|Hg17|chrX (152368380-152368883)
               

               
               60-599, gnl|Mm7|chrX (68959060-68959583)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               hyp (0.142837)
               

               
               pgl (0.118483)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               pgl (0.118483)
               

               
               ecc (0.115035)

	60-599, gnl\|bosTau2\|chrX (13688706-13688171)
	60-599, gnl\|Hg17\|chrX (152368380-152368883)
	60-599, gnl\|Mm7\|chrX (68959060-68959583)