Non-Coding RNA Search

Ss1.1-recc2811c_f13.5

Sequence:


               
               CTGCGTTCCTGTACGGGCTCTAAAGCCACAGAACTGACAAGCCCCTGCTTCCCCACCCCC
TCCTCAGGCTCCTGCGAGCACACCCTGAGCCCCATATCCCTGCCTGTTCCACGCCGCCGC
CGGGGACAGCAGAACTTCCTCCCTGACCCCCCTTCCTGTCATGATCCCAGCCCTCCCTCG
AAAGCTTCTCCCCACAGTGACACTGGCCGACCTCTGTCCTTGGGGCCGGAACCATGAGAA
GGAAGCTCAGCACTCCTCCACGGTTGCCCTGTTGAAGATAACTGTTTTTATTAACTGAAT
TATTATGTTTTTTTCATGGACCAAAATTTTTTTTGTACTGCCCCCCTTATCGATGTCACC
CAGTTTTAATAAAAGAAACTTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCGTTCCTGTACGGGCTCTAAAGCCACAGAACTGACAAGCCCCTGCTTCCCCACCCCC
TCCTCAGGCTCCTGCGAGCACACCCTGAGCCCCATATCCCTGCCTGTTCCACGCCGCCGC
CGGGGACAGCAGAACTTCCTCCCTGACCCCCCTTCCTGTCATGATCCCAGCCCTCCCTCG
AAAGCTTCTCCCCACAGTGACACTGGCCGACCTCTGTCCTTGGGGCCGGAACCATGAGAA
GGAAGCTCAGCACTCCTCCACGGTTGCCCTGTTGAAGATAACTGTTTTTATTAACTGAAT
TATTATGTTTTTTTCATGGACCAAAATTTTTTTTGTACTGCCCCCCTTATCGATGTCACC
CAGTTTTAATAAAAGAAACTTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               15-394, gnl|bosTau2|chr20 (11177175-11176810)
               

               
               15-394, gnl|Hg17|chr12 (48780333-48780690)
               

               
               15-394, gnl|Mm7|chr15 (99698846-99699212)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-394, gnl|bosTau2|chr20 (11177175-11176810)
               

               
               15-394, gnl|Hg17|chr12 (48780333-48780690)
               

               
               15-394, gnl|Mm7|chr15 (99698846-99699212)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fce (0.271592)
               

               
               ecc (0.23007)
               

               
               pty (0.142714)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               ecc (0.23007)
               

               
               pty (0.142714)

	15-394, gnl\|bosTau2\|chr20 (11177175-11176810)
	15-394, gnl\|Hg17\|chr12 (48780333-48780690)
	15-394, gnl\|Mm7\|chr15 (99698846-99699212)