Non-Coding RNA Search

Ss1.1-recc2813c_p19.5

Sequence:


               
               CTAGAGCTGCCCTAGGGTGACCTTGATGTCAGTATTGACGGCTACAGATTAAGGTCCTTA
GAGTAGTTGACATCAGTACAACTTTCTAGAAGAGAATTAAATTTCAACATTAAGTTTAAA
GGGATCATAATTCTGCAGGTATCTTTCTCTGAGTGACTGAATGTGACTATTACATTAGGG
TAAATGAATTAAGAAGTGCAAGTGGGATTTACTGTATGTTAGAAAGGAGTTTTGCAGCCA
AGACTGCCTTGAATAAAATGTGTTTGCACTGAAAAAAAAATTTTAAATTACTTGGTCTCT
GGTTGCTGTAAAGGTCATCCACGATGGATGTTCTGTTTATATGGTATAGTATTTCATATG
AAATAATTACAGTTCATGAAATGTCTTCCCTAACGTTACTGATTTATAACAGCACATTTG
TAACATGGTTTTTATCGTGTCAGTGTACCATATTGTAAATGATGATTACTTGTCATGCTT
AGTATAATAACTTAAAAGAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGAGCTGCCCTAGGGTGACCTTGATGTCAGTATTGACGGCTACAGATTAAGGTCCTTA
GAGTAGTTGACATCAGTACAACTTTCTAGAAGAGAATTAAATTTCAACATTAAGTTTAAA
GGGATCATAATTCTGCAGGTATCTTTCTCTGAGTGACTGAATGTGACTATTACATTAGGG
TAAATGAATTAAGAAGTGCAAGTGGGATTTACTGTATGTTAGAAAGGAGTTTTGCAGCCA
AGACTGCCTTGAATAAAATGTGTTTGCACTGAAAAAAAAATTTTAAATTACTTGGTCTCT
GGTTGCTGTAAAGGTCATCCACGATGGATGTTCTGTTTATATGGTATAGTATTTCATATG
AAATAATTACAGTTCATGAAATGTCTTCCCTAACGTTACTGATTTATAACAGCACATTTG
TAACATGGTTTTTATCGTGTCAGTGTACCATATTGTAAATGATGATTACTTGTCATGCTT
AGTATAATAACTTAAAAGAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-502, gnl|bosTau2|chr27 (7466675-7467178)
               

               
               2-502, gnl|Hg17|chr4 (185319186-185319689)
               

               
               2-502, gnl|Mm7|chr8 (45958313-45957806)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-502, gnl|bosTau2|chr27 (7466675-7467178)
               

               
               2-502, gnl|Hg17|chr4 (185319186-185319689)
               

               
               2-502, gnl|Mm7|chr8 (45958313-45957806)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fbs (0.350693)
               

               
               eye (0.170503)
               

               
               ecc (0.115035)
               

               
               cty (0.10408)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.350693)
               

               
               eye (0.170503)
               

               
               ecc (0.115035)
               

               
               cty (0.10408)

	2-502, gnl\|bosTau2\|chr27 (7466675-7467178)
	2-502, gnl\|Hg17\|chr4 (185319186-185319689)
	2-502, gnl\|Mm7\|chr8 (45958313-45957806)