Non-Coding RNA Search

Ss1.1-recc2815c_b20.5

Sequence:


               
               CTGGTTTGGGCAGCAATTACGTAACGTCCAAAAAGATGGACCTAGATGAAGACACTGCTG
AAAAATGTTACCAAAACTTACTGGAACTGGAAAAGCATGTCAGGGTTACCATTAAAAAAA
CTGATAACCAGAGCTGATGATGAGGCTCTCTGAAACCTTTCATACCGTCTGTGGATTCTG
GAGCATGTCGGTTTCTACTGAGGGGGATGATACGCATTTGTGGTAAATTATGAACTCTGA
TAGTCTCTTCCTTCATTTCAGAATCACCTCTCGGGCTGTGCCTGAGGAAAAGATTGATAA
AATGTCAGTTATTCTTAAGAATGGTGTCACATTAAAATTGAGTCACCCAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGTTTGGGCAGCAATTACGTAACGTCCAAAAAGATGGACCTAGATGAAGACACTGCTG
AAAAATGTTACCAAAACTTACTGGAACTGGAAAAGCATGTCAGGGTTACCATTAAAAAAA
CTGATAACCAGAGCTGATGATGAGGCTCTCTGAAACCTTTCATACCGTCTGTGGATTCTG
GAGCATGTCGGTTTCTACTGAGGGGGATGATACGCATTTGTGGTAAATTATGAACTCTGA
TAGTCTCTTCCTTCATTTCAGAATCACCTCTCGGGCTGTGCCTGAGGAAAAGATTGATAA
AATGTCAGTTATTCTTAAGAATGGTGTCACATTAAAATTGAGTCACCCAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAGCCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               34-313, gnl|bosTau2|chr3 (6871645-6871923)
               

               
               34-313, gnl|Hg17|chr1 (159513744-159514334)
               

               
               34-313, gnl|Mm7|chr1 (169929612-169929294)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-313, gnl|bosTau2|chr3 (6871645-6871923)
               

               
               34-313, gnl|Hg17|chr1 (159513744-159514334)
               

               
               34-313, gnl|Mm7|chr1 (169929612-169929294)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               ecc (0.115035)

	34-313, gnl\|bosTau2\|chr3 (6871645-6871923)
	34-313, gnl\|Hg17\|chr1 (159513744-159514334)
	34-313, gnl\|Mm7\|chr1 (169929612-169929294)