Ss1.1-recc2817c_l1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACTAGCCGGACTGAGAGGTGAAACCCAGGAGGGCACAGGAGCCCAGTTACCCGAGCCCC AGAGACAGCTCGTCACCCGCCTCCACAGCATGGCTGGCATGGTGCTCGGCGTGGGGGCTG GCGTGTTCATCCTGGCCCTGCTCTGGGTGTCAGTGCTGCTGCTGTGTGTGCTGCTGTCCA GAGCCTCCGGTGTAGCTCGGTTCTCCATTATTTTCGTGTTCCTCGGTGCTCTGATCATCA CAGCAATTCTGTTGCTCTTCCCCCGAGCCAGTGAACTCCCAACCCCTGAGGCTGAAATGA AGATCGTTGATACCTTTTTCATTGGCCGCTATGTCCTGCTGGCTTTCCTCACTGCTGTCT TCTTGGGGAGCCTCTTCTTGGTTCTAGTCCATCACATCCTGGAGCCAGTCTATGCCAAAC CACTTCGGTCCTACTGAGCAACACTCAAGAAGACCAAGACCTTTCCTCCCCTCGCTTTGA TATCATCAGTGAGCAGAAAGGTACTGTTGGAACGTTGTCTTGACAGCATTCATGCTTAAG ATCAGAGGAACATCTATTCATCACTCAGACAAACCCCTTGAGTCCTGGCTTCCAGAAACA TGGTTGCAGAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACTAGCCGGACTGAGAGGTGAAACCCAGGAGGGCACAGGAGCCCAGTTACCCGAGCCCC AGAGACAGCTCGTCACCCGCCTCCACAGCATGGCTGGCATGGTGCTCGGCGTGGGGGCTG GCGTGTTCATCCTGGCCCTGCTCTGGGTGTCAGTGCTGCTGCTGTGTGTGCTGCTGTCCA GAGCCTCCGGTGTAGCTCGGTTCTCCATTATTTTCGTGTTCCTCGGTGCTCTGATCATCA CAGCAATTCTGTTGCTCTTCCCCCGAGCCAGTGAACTCCCAACCCCTGAGGCTGAAATGA AGATCGTTGATACCTTTTTCATTGGCCGCTATGTCCTGCTGGCTTTCCTCACTGCTGTCT TCTTGGGGAGCCTCTTCTTGGTTCTAGTCCATCACATCCTGGAGCCAGTCTATGCCAAAC CACTTCGGTCCTACTGAGCAACACTCAAGAAGACCAAGACCTTTCCTCCCCTCGCTTTGA TATCATCAGTGAGCAGAAAGGTACTGTTGGAACGTTGTCTTGACAGCATTCATGCTTAAG ATCAGAGGAACATCTATTCATCACTCAGACAAACCCCTTGAGTCCTGGCTTCCAGAAACA TGGTTGCAGAAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 73-201, gnl|bosTau2|chr29 (20545586-20545714) | |
| 73-201, gnl|canFam2|chr5 (12373565-12373450) | |
| 73-201, gnl|dasNov1|scaffold_14265 (27327-27443) | |
| 73-201, gnl|echTel1|scaffold_264163 (15567-15683) | |
| 73-201, gnl|hg17|chr11 (124477233-124477349) | |
| 73-201, gnl|Hg17|chr11 (124477374-124477236) | |
| 73-201, gnl|loxAfr1|scaffold_120424 (4739-4624) | |
| 73-201, gnl|mm7|chr9 (37147001-37146885) | |
| 73-201, gnl|Mm7|chr9 (37146877-37146996) | |
| 73-201, gnl|monDom2|scaffold_15 (10851960-10852076) | |
| 73-201, gnl|oryCun1|scaffold_202687 (57021-57137) | |
| 73-201, gnl|panTro1|chr9 (126560999-126561115) | |
| 73-201, gnl|rheMac2|chr14 (123249500-123249616) | |
| 73-201, gnl|rn3|chr8 (38478632-38478516) | |
| 73-201, gnl|tetNig1|chr7 (689736-689831) | |
| 73-201, gnl|xenTro1|scaffold_315 (662462-662347) | |
| 301-611, gnl|bosTau2|chr29 (20550814-20551128) | |
| 301-611, gnl|canFam2|chr5 (12378671-12378281) | |
| 301-611, gnl|dasNov1|scaffold_14265 (22022-22418) | |
| 301-611, gnl|echTel1|scaffold_264163 (2716-3069) | |
| 301-611, gnl|hg17|chr11 (124472357-124472728) | |
| 301-611, gnl|Hg17|chr11 (124472848-124472535) | |
| 301-611, gnl|loxAfr1|scaffold_46957 (11847-12208) | |
| 301-611, gnl|mm7|chr9 (37151581-37151217) | |
| 301-611, gnl|Mm7|chr9 (37151095-37151386) | |
| 301-611, gnl|monDom2|scaffold_15 (10847677-10848032) | |
| 301-611, gnl|oryCun1|scaffold_202687 (52294-52679) | |
| 301-611, gnl|panTro1|chr9 (126556128-126556499) | |
| 301-611, gnl|rn3|chr8 (38483186-38482817) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 73-201, gnl|bosTau2|chr29 (20545586-20545714) | |
| 73-201, gnl|canFam2|chr5 (12373565-12373450) | |
| 73-201, gnl|dasNov1|scaffold_14265 (27327-27443) | |
| 73-201, gnl|echTel1|scaffold_264163 (15567-15683) | |
| 73-201, gnl|hg17|chr11 (124477233-124477349) | |
| 73-201, gnl|Hg17|chr11 (124477374-124477236) | |
| 73-201, gnl|loxAfr1|scaffold_120424 (4739-4624) | |
| 73-201, gnl|mm7|chr9 (37147001-37146885) | |
| 73-201, gnl|Mm7|chr9 (37146877-37146996) | |
| 73-201, gnl|monDom2|scaffold_15 (10851960-10852076) | |
| 73-201, gnl|oryCun1|scaffold_202687 (57021-57137) | |
| 73-201, gnl|panTro1|chr9 (126560999-126561115) | |
| 73-201, gnl|rheMac2|chr14 (123249500-123249616) | |
| 73-201, gnl|rn3|chr8 (38478632-38478516) | |
| 73-201, gnl|tetNig1|chr7 (689736-689831) | |
| 73-201, gnl|xenTro1|scaffold_315 (662462-662347) | |
| 301-611, gnl|bosTau2|chr29 (20550814-20551128) | |
| 301-611, gnl|canFam2|chr5 (12378671-12378281) | |
| 301-611, gnl|dasNov1|scaffold_14265 (22022-22418) | |
| 301-611, gnl|echTel1|scaffold_264163 (2716-3069) | |
| 301-611, gnl|hg17|chr11 (124472357-124472728) | |
| 301-611, gnl|Hg17|chr11 (124472848-124472535) | |
| 301-611, gnl|loxAfr1|scaffold_46957 (11847-12208) | |
| 301-611, gnl|mm7|chr9 (37151581-37151217) | |
| 301-611, gnl|Mm7|chr9 (37151095-37151386) | |
| 301-611, gnl|monDom2|scaffold_15 (10847677-10848032) | |
| 301-611, gnl|oryCun1|scaffold_202687 (52294-52679) | |
| 301-611, gnl|panTro1|chr9 (126556128-126556499) | |
| 301-611, gnl|rn3|chr8 (38483186-38482817) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| elu (0.385356) | |
| ssp (0.13552) | |
| cov (0.132153) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.385356) | |
| ssp (0.13552) | |
| cov (0.132153) | |
| ecc (0.115035) |