Ss1.1-recc2817c_l4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCACTCTGACATCATCTTCTCCAATGACAACCTGACTGTGACCTGCAGTAGCTATGAT GACCGAGTGGTGCTGGGGAAGACCGGCTTCTCCAAGGGCGTCCACTACTGGGAGCTCACT GTGGATCGCTACGACAACCACCCCGACCCTGCCTTCGGCGTGGCTCGCATCGACGTGATG AAGGATGTGATGTTAGGAAAGGACGACAAAGCATGGGCAATAACCGAGGGAGGGATCACA AAGGGGGCCACAATCGGGGTCCTCCTCGACTTAAATAGAAAAACCCTGACATTTTTTATC AACGATGAACAGCAAGGTCCCGTAGCGTTTGACAACGTGGAGGGGCTGTTCTTCCCGGCA GTCAGCCTGAACCTCTTCCCCCAGGTCACGCTTCACACCGGGCTCCCAGTCCCCGACTTC TACTCCAGCAGAGCATCAATTGCCTAAGTATGTGCGGTGGAGGCGCCAGCAGCCTATTCT TCCCTCTGCCTGGAGGGTGACAGCAAGGAGCTCCGTCAGAGCTGGAGAGAGAGGAAGGAA GAGGAGAGAAACACTGATCCTCACACCCCACACCCCACCCCTTTCCCTCCAGCCTCTCTG CTGCTGTAAAACCTGCTTTCTCCTCCATGTTCAGCAATTCTAGCCAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCACTCTGACATCATCTTCTCCAATGACAACCTGACTGTGACCTGCAGTAGCTATGAT GACCGAGTGGTGCTGGGGAAGACCGGCTTCTCCAAGGGCGTCCACTACTGGGAGCTCACT GTGGATCGCTACGACAACCACCCCGACCCTGCCTTCGGCGTGGCTCGCATCGACGTGATG AAGGATGTGATGTTAGGAAAGGACGACAAAGCATGGGCAATAACCGAGGGAGGGATCACA AAGGGGGCCACAATCGGGGTCCTCCTCGACTTAAATAGAAAAACCCTGACATTTTTTATC AACGATGAACAGCAAGGTCCCGTAGCGTTTGACAACGTGGAGGGGCTGTTCTTCCCGGCA GTCAGCCTGAACCTCTTCCCCCAGGTCACGCTTCACACCGGGCTCCCAGTCCCCGACTTC TACTCCAGCAGAGCATCAATTGCCTAAGTATGTGCGGTGGAGGCGCCAGCAGCCTATTCT TCCCTCTGCCTGGAGGGTGACAGCAAGGAGCTCCGTCAGAGCTGGAGAGAGAGGAAGGAA GAGGAGAGAAACACTGATCCTCACACCCCACACCCCACCCCTTTCCCTCCAGCCTCTCTG CTGCTGTAAAACCTGCTTTCTCCTCCATGTTCAGCAATTCTAGCCAAC |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 1-221, gnl|bosTau2|chr10 (29393308-29393088) | |
| 1-221, gnl|Hg17|chr14 (50518542-50518322) | |
| 1-221, gnl|Mm7|chr12 (68192223-68192003) | |
| 222-372, gnl|bosTau2|chr10 (29389916-29389766) | |
| 222-372, gnl|canFam2|chr8 (30344036-30344221) | |
| 222-372, gnl|danRer3|chr13 (39543283-39543468) | |
| 222-372, gnl|dasNov1|scaffold_2618 (83246-83431) | |
| 222-372, gnl|echTel1|scaffold_293870 (3652-3467) | |
| 222-372, gnl|fr1|chrUn (2681280-2681092) | |
| 222-372, gnl|galGal2|chr5 (54658187-54658372) | |
| 222-372, gnl|hg17|chr14 (50515853-50516038) | |
| 222-372, gnl|Hg17|chr14 (50516017-50515867) | |
| 222-372, gnl|loxAfr1|scaffold_3145 (24681-24866) | |
| 222-372, gnl|mm7|chr12 (68189255-68189440) | |
| 222-372, gnl|Mm7|chr12 (68189419-68189269) | |
| 222-372, gnl|monDom2|scaffold_73 (7376461-7376646) | |
| 222-372, gnl|oryCun1|scaffold_204695 (83360-83545) | |
| 222-372, gnl|panTro1|chr15 (49934765-49934950) | |
| 222-372, gnl|rheMac2|chr7 (114027402-114027587) | |
| 222-372, gnl|rn3|chr6 (92365234-92365416) | |
| 222-372, gnl|tetNig1|chr10 (11250270-11250092) | |
| 222-372, gnl|xenTro1|scaffold_341 (992412-992597) | |
| 373-648, gnl|bosTau2|chr10 (29387517-29387240) | |
| 373-648, gnl|canFam2|chr8 (30341655-30341967) | |
| 373-648, gnl|echTel1|scaffold_293870 (6271-6000) | |
| 373-648, gnl|galGal2|chr5 (54657243-54657460) | |
| 373-648, gnl|hg17|chr14 (50513476-50513780) | |
| 373-648, gnl|Hg17|chr14 (50513833-50513530) | |
| 373-648, gnl|mm7|chr12 (68187132-68187402) | |
| 373-648, gnl|Mm7|chr12 (68187455-68187186) | |
| 373-648, gnl|monDom2|scaffold_73 (7375428-7375759) | |
| 373-648, gnl|oryCun1|scaffold_204695 (79065-79368) | |
| 373-648, gnl|panTro1|chr15 (49932370-49932674) | |
| 373-648, gnl|rheMac2|chr7 (114024690-114024994) | |
| 373-648, gnl|rn3|chr6 (92363109-92363384) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-221, gnl|bosTau2|chr10 (29393308-29393088) | |
| 1-221, gnl|Hg17|chr14 (50518542-50518322) | |
| 1-221, gnl|Mm7|chr12 (68192223-68192003) | |
| 222-372, gnl|bosTau2|chr10 (29389916-29389766) | |
| 222-372, gnl|canFam2|chr8 (30344036-30344221) | |
| 222-372, gnl|danRer3|chr13 (39543283-39543468) | |
| 222-372, gnl|dasNov1|scaffold_2618 (83246-83431) | |
| 222-372, gnl|echTel1|scaffold_293870 (3652-3467) | |
| 222-372, gnl|fr1|chrUn (2681280-2681092) | |
| 222-372, gnl|galGal2|chr5 (54658187-54658372) | |
| 222-372, gnl|hg17|chr14 (50515853-50516038) | |
| 222-372, gnl|Hg17|chr14 (50516017-50515867) | |
| 222-372, gnl|loxAfr1|scaffold_3145 (24681-24866) | |
| 222-372, gnl|mm7|chr12 (68189255-68189440) | |
| 222-372, gnl|Mm7|chr12 (68189419-68189269) | |
| 222-372, gnl|monDom2|scaffold_73 (7376461-7376646) | |
| 222-372, gnl|oryCun1|scaffold_204695 (83360-83545) | |
| 222-372, gnl|panTro1|chr15 (49934765-49934950) | |
| 222-372, gnl|rheMac2|chr7 (114027402-114027587) | |
| 222-372, gnl|rn3|chr6 (92365234-92365416) | |
| 222-372, gnl|tetNig1|chr10 (11250270-11250092) | |
| 222-372, gnl|xenTro1|scaffold_341 (992412-992597) | |
| 373-648, gnl|bosTau2|chr10 (29387517-29387240) | |
| 373-648, gnl|canFam2|chr8 (30341655-30341967) | |
| 373-648, gnl|echTel1|scaffold_293870 (6271-6000) | |
| 373-648, gnl|galGal2|chr5 (54657243-54657460) | |
| 373-648, gnl|hg17|chr14 (50513476-50513780) | |
| 373-648, gnl|Hg17|chr14 (50513833-50513530) | |
| 373-648, gnl|mm7|chr12 (68187132-68187402) | |
| 373-648, gnl|Mm7|chr12 (68187455-68187186) | |
| 373-648, gnl|monDom2|scaffold_73 (7375428-7375759) | |
| 373-648, gnl|oryCun1|scaffold_204695 (79065-79368) | |
| 373-648, gnl|panTro1|chr15 (49932370-49932674) | |
| 373-648, gnl|rheMac2|chr7 (114024690-114024994) | |
| 373-648, gnl|rn3|chr6 (92363109-92363384) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.115035) |