Non-Coding RNA Search

Ss1.1-recc2818c_l14.5

Sequence:


               
               GACCAAATCCTCTTATAAGGAACAAATGCAAAAGAATTTCTTTGGTGAAATGATTTTGTA
GATTTGATTTTGGAATAGACTTTTTAACCTTCATTCACTTAAAGAAAATTATCAACTCTT
TTATGGTCCAGTTTCAGATATTTTCTTAATCCAGAAGATGTGACTGTTCCCAGAAGAAAC
TTCTTATGCCACATTTAAAACATCAAAAATAGTTACGTTTTCATTCATTCTAATGGGTAA
ATTATTTGAATTGTAATAACTGTATATCTACAAACAGGTTTATAAAATATTTGTCTATCA
AGTTAATAGTAAAAAAATGATGGCGTCTGCAAGGAAAAATATGAAGCCCACTTAAAGTGG
TTCAGAGATTTCTTTTGTCTTCTAGGGCAATAGGTTTTTGTTTAGACAGGCTTTTTCAGT
ATTTAATTTTAAAGTTTCCTATAACTGTCAGTTTCCCAGGTTGAAGATGACGTTGAGTTT
TCTACTGATCGATGCTTGTCCTCCCCAGTGTTTCTGTCACTGGCTCACTAAAACAGTATT
TATATAGCTCCACTGGCTTTAAAGCTCTTAGTCCTTCTAACATTTGGGATTTTACAAGGA
AAAATGGGAAAAAGTAGAAAAGAGACAATCAAATGCCTGGAGCTTAAAACAAAGTATGTG
CAACCTACCATCTCACTTGAAATTTAATAAAATAAATAATTATGTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCAAATCCTCTTATAAGGAACAAATGCAAAAGAATTTCTTTGGTGAAATGATTTTGTA
GATTTGATTTTGGAATAGACTTTTTAACCTTCATTCACTTAAAGAAAATTATCAACTCTT
TTATGGTCCAGTTTCAGATATTTTCTTAATCCAGAAGATGTGACTGTTCCCAGAAGAAAC
TTCTTATGCCACATTTAAAACATCAAAAATAGTTACGTTTTCATTCATTCTAATGGGTAA
ATTATTTGAATTGTAATAACTGTATATCTACAAACAGGTTTATAAAATATTTGTCTATCA
AGTTAATAGTAAAAAAATGATGGCGTCTGCAAGGAAAAATATGAAGCCCACTTAAAGTGG
TTCAGAGATTTCTTTTGTCTTCTAGGGCAATAGGTTTTTGTTTAGACAGGCTTTTTCAGT
ATTTAATTTTAAAGTTTCCTATAACTGTCAGTTTCCCAGGTTGAAGATGACGTTGAGTTT
TCTACTGATCGATGCTTGTCCTCCCCAGTGTTTCTGTCACTGGCTCACTAAAACAGTATT
TATATAGCTCCACTGGCTTTAAAGCTCTTAGTCCTTCTAACATTTGGGATTTTACAAGGA
AAAATGGGAAAAAGTAGAAAAGAGACAATCAAATGCCTGGAGCTTAAAACAAAGTATGTG
CAACCTACCATCTCACTTGAAATTTAATAAAATAAATAATTATGTAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-708, gnl|bosTau2|chrX (10051340-10052050)
               

               
               2-708, gnl|Hg17|chr12 (23574690-23573973)
               

               
               2-708, gnl|Mm7|chr6 (143920119-143919387)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-708, gnl|bosTau2|chrX (10051340-10052050)
               

               
               2-708, gnl|Hg17|chr12 (23574690-23573973)
               

               
               2-708, gnl|Mm7|chr6 (143920119-143919387)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	2-708, gnl\|bosTau2\|chrX (10051340-10052050)
	2-708, gnl\|Hg17\|chr12 (23574690-23573973)
	2-708, gnl\|Mm7\|chr6 (143920119-143919387)