Non-Coding RNA Search

Ss1.1-recc2820c_n21.5

Sequence:


               
               GGTTGAGTTGACGGTTCTCGTGATGTGTAAACCCCCGAGACCCACCTGGAGGGTTTATTT
AGGGCTTTCTGTTTGTCCTTTGCGTTTCCGGTTTCGTTTGGTTTGGGTACCGTTTCTCCA
TTTACAGCCAAATGAGTTTTGTGATGTCGAAAACTTTTACTGACGTCAAATGGAGGAAAG
GAACAGAAAAAAAAAGAAAAAAAAAAGATTTTTACAAAGTAATAAAATTGAAAACTGAGC
TGTTTAAATGTTGCTGTTCTTACCTGTCTGTCCTTGTCCGGAAGTGGGACGTTCCCAGGG
AAGAAGAGGAAGGTTCCACTTGGTTTCTTATGTTGCCAAAAGCCCCATCCCAGGATTCAG
CACCCCCTCCCCGCCCCCCACCCAGCCCCGAATTCTCGCAACATTATTTCCCAGTTGGTT
GATGCCAAGGCAAAAAGACATTCTTTTAATGGTTAGAGAGGATCAGTTGCCTAAATGATT
TCATGTCAGTGTTGTATTTATGGTTTTACAATAAAACGACCTTTAGGAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTGAGTTGACGGTTCTCGTGATGTGTAAACCCCCGAGACCCACCTGGAGGGTTTATTT
AGGGCTTTCTGTTTGTCCTTTGCGTTTCCGGTTTCGTTTGGTTTGGGTACCGTTTCTCCA
TTTACAGCCAAATGAGTTTTGTGATGTCGAAAACTTTTACTGACGTCAAATGGAGGAAAG
GAACAGAAAAAAAAAGAAAAAAAAAAGATTTTTACAAAGTAATAAAATTGAAAACTGAGC
TGTTTAAATGTTGCTGTTCTTACCTGTCTGTCCTTGTCCGGAAGTGGGACGTTCCCAGGG
AAGAAGAGGAAGGTTCCACTTGGTTTCTTATGTTGCCAAAAGCCCCATCCCAGGATTCAG
CACCCCCTCCCCGCCCCCCACCCAGCCCCGAATTCTCGCAACATTATTTCCCAGTTGGTT
GATGCCAAGGCAAAAAGACATTCTTTTAATGGTTAGAGAGGATCAGTTGCCTAAATGATT
TCATGTCAGTGTTGTATTTATGGTTTTACAATAAAACGACCTTTAGGAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-529, gnl|bosTau2|chr8 (58221020-58221537)
               

               
               1-529, gnl|Hg17|chr9 (113897928-113898427)
               

               
               1-529, gnl|Mm7|chr4 (62572889-62573404)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-529, gnl|bosTau2|chr8 (58221020-58221537)
               

               
               1-529, gnl|Hg17|chr9 (113897928-113898427)
               

               
               1-529, gnl|Mm7|chr4 (62572889-62573404)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cut (0.169924)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)
               

               
               ecc (0.115035)

	1-529, gnl\|bosTau2\|chr8 (58221020-58221537)
	1-529, gnl\|Hg17\|chr9 (113897928-113898427)
	1-529, gnl\|Mm7\|chr4 (62572889-62573404)