Non-Coding RNA Search

Ss1.1-recc2823c_c10.5

Sequence:


               
               TTATTTATTATTAAATTTATCTTTCAAGAAACATCAAGTATTTTCACTCATTTTTATTTT
ATTTTTAAACCCTGTAGCTTTAAGAAACAGATCTCTAAATCTTTTTTTTTACACGAATCC
TTTCTAAAAACTAAAATGAAATAACAACAAAATAGACAACCAGTGTAATAACCTGACCAA
TAAATGTTTCTTTGAACCCTAAAATAAAATCCTACTTATTAAAAACAAACCAAATGTAGT
GGAAAGACATTTCTGTATTGTTTTAAGTGCTTCTCCTGGCTTTCCTCTCTCACTAGGCCA
CCGCCTTCACCTCTACCGACAGCGGGCGCCCTCCTGAGGGTGGGGAGGGGGGCGCGGGCA
GGAGGGGCGAATTCTCCAGGCAGTGCTCTGGGGGGCACCAGGGGTCTCAGAGTTAGAATT
GCACATTAGCCTTTGTTTGCCTTTTAAATTCGCAAGATGTCATTTATTTGTGTATGTGTG
TTTTTCTTGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATTTATTATTAAATTTATCTTTCAAGAAACATCAAGTATTTTCACTCATTTTTATTTT
ATTTTTAAACCCTGTAGCTTTAAGAAACAGATCTCTAAATCTTTTTTTTTACACGAATCC
TTTCTAAAAACTAAAATGAAATAACAACAAAATAGACAACCAGTGTAATAACCTGACCAA
TAAATGTTTCTTTGAACCCTAAAATAAAATCCTACTTATTAAAAACAAACCAAATGTAGT
GGAAAGACATTTCTGTATTGTTTTAAGTGCTTCTCCTGGCTTTCCTCTCTCACTAGGCCA
CCGCCTTCACCTCTACCGACAGCGGGCGCCCTCCTGAGGGTGGGGAGGGGGGCGCGGGCA
GGAGGGGCGAATTCTCCAGGCAGTGCTCTGGGGGGCACCAGGGGTCTCAGAGTTAGAATT
GCACATTAGCCTTTGTTTGCCTTTTAAATTCGCAAGATGTCATTTATTTGTGTATGTGTG
TTTTTCTTGAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-492, gnl|bosTau2|chr13 (5641804-5642277)
               

               
               1-492, gnl|Hg17|chr10 (11411809-11411331)
               

               
               1-492, gnl|Mm7|chr2 (6463568-6464059)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-492, gnl|bosTau2|chr13 (5641804-5642277)
               

               
               1-492, gnl|Hg17|chr10 (11411809-11411331)
               

               
               1-492, gnl|Mm7|chr2 (6463568-6464059)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               che (0.136314)
               

               
               med (0.116252)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               med (0.116252)
               

               
               ecc (0.115035)

	1-492, gnl\|bosTau2\|chr13 (5641804-5642277)
	1-492, gnl\|Hg17\|chr10 (11411809-11411331)
	1-492, gnl\|Mm7\|chr2 (6463568-6464059)