Non-Coding RNA Search

Ss1.1-recc2824c_n15.5

Sequence:


               
               GGCCAGGATGGCCCCATCTCTGTCCACTGCAGCGCCGGCGTGGGCAGGACGGGTGTCTTC
ATCACGCTCAGCATCGTGCTGGAGCGGATGCGGTACGAAGGCGTGGTGGACATCTTCCAG
ACCGTGAAGATGCTGCGGACCCAGAGGCCAGCCATGGTGCAGACGGAGGATGAGTACCAG
TTCTGCTACCAGGCGGCGCTGGAGTACCTCGGGAGCTTTGACCACTATGCAACCTAGAGC
CAAGTCGGCCCGGCCGGACTCCGCCGGCCCCAACGCCTCCCGTGCCGGGTGGGCCCCGAG
GTCTGGACCCAGGCAGCCAGGGCAGGAGGCGGCGGCCAAGTTTCCGCCGGGTCTCCAGGA
ACGCTGCGGCCCCTCGAGCCCCCCACGCGGCCCCAGCCACCTCCCTGGACGGGCCGCCGC
CTTTGATACTTGGCACATTCCTCATTTCCTTCTGATTCCAAAACCGAGAGATTCCGGGGT
GGGGGGTGGGGGGGGCGGTGAACAAACAGGGGTTCTCCCCAGAACCAGAGGAGGGCGGGG
GCTGTAAACTTGACCCCTTGTCCTCCCTCTCGGAGCCTTCCCGCCCAGCAGCCTGGGGCG
GGCTGGGGCAGCAGGGAGCAGGGGGCCGGATCCCGCTTTCTTTCAGACTCGGTGTAACTG
TATCCAGTGACATTTCCTTTTTTTTAAATAGTGTATTTTTTTTTCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCAGGATGGCCCCATCTCTGTCCACTGCAGCGCCGGCGTGGGCAGGACGGGTGTCTTC
ATCACGCTCAGCATCGTGCTGGAGCGGATGCGGTACGAAGGCGTGGTGGACATCTTCCAG
ACCGTGAAGATGCTGCGGACCCAGAGGCCAGCCATGGTGCAGACGGAGGATGAGTACCAG
TTCTGCTACCAGGCGGCGCTGGAGTACCTCGGGAGCTTTGACCACTATGCAACCTAGAGC
CAAGTCGGCCCGGCCGGACTCCGCCGGCCCCAACGCCTCCCGTGCCGGGTGGGCCCCGAG
GTCTGGACCCAGGCAGCCAGGGCAGGAGGCGGCGGCCAAGTTTCCGCCGGGTCTCCAGGA
ACGCTGCGGCCCCTCGAGCCCCCCACGCGGCCCCAGCCACCTCCCTGGACGGGCCGCCGC
CTTTGATACTTGGCACATTCCTCATTTCCTTCTGATTCCAAAACCGAGAGATTCCGGGGT
GGGGGGTGGGGGGGGCGGTGAACAAACAGGGGTTCTCCCCAGAACCAGAGGAGGGCGGGG
GCTGTAAACTTGACCCCTTGTCCTCCCTCTCGGAGCCTTCCCGCCCAGCAGCCTGGGGCG
GGCTGGGGCAGCAGGGAGCAGGGGGCCGGATCCCGCTTTCTTTCAGACTCGGTGTAACTG
TATCCAGTGACATTTCCTTTTTTTTAAATAGTGTATTTTTTTTTCCAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8CC23_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8CC23_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               30-174, gnl|bosTau2|chr7 (15540554-15540697)
               

               
               30-174, gnl|Hg17|chr19 (5159071-5158928)
               

               
               30-174, gnl|Mm7|chr17 (54572116-54571973)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-174, gnl|bosTau2|chr7 (15540554-15540697)
               

               
               30-174, gnl|Hg17|chr19 (5159071-5158928)
               

               
               30-174, gnl|Mm7|chr17 (54572116-54571973)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ese (0.379507)
               

               
               ecc (0.23007)
               

               
               nmm (0.132802)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.379507)
               

               
               ecc (0.23007)
               

               
               nmm (0.132802)

	30-174, gnl\|bosTau2\|chr7 (15540554-15540697)
	30-174, gnl\|Hg17\|chr19 (5159071-5158928)
	30-174, gnl\|Mm7\|chr17 (54572116-54571973)