Non-Coding RNA Search

Ss1.1-recc2826c_l15.5

Sequence:


               
               GAGAGGAGCCAGAAAAGAAGGATGGGGATGCGAGGCTGAGTCCCGGGTACGAGAAGGTAG
TTGAGGGCTGATTAGGAACAGAGATATTTGTGTTGTAGGTGCAGGAAGGAAGCTTGGGGA
GTCCACCATGGACGGCCTCCATACAGATCGAGAACCTGGAAACAAGGTCAGGGCCTGGAC
GAGGGTAAAGGGCCGAGCAGCCACTGAACAGAGGGGACGAGGCAGAAGGCCAGGGCCAGG
TTTCTCCTTGGCACAGCACTGCTTCATTCCTCTGGTGCTAAAAAATCAGGAGGCCCCAAG
AGCGACAGGGTAAAACTTTTGCTGCGTTGTGATTTGCATTGCCTTTCAGTGTGTTAACCC
TGTAATTGCAGTACTGAATACAACCATTCTTTTAACTGATTCTTCTCTTCCCTTTCAGTT
AGAAATCCTGTGTTCTGTCAACATTCTCCAGTTTATATTCATTGCCTTAAGACTGGACAA
GATCATCCACTGGCCCTGGCTTGTATGTAACTTTTTACATCCTTAAGAAAACTTTTTATT
TTAAAAGTCATTCATGTTCATTGTAGAAATCTCGGAAAAAGACAGACGAGCAGAGGTGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGGAGCCAGAAAAGAAGGATGGGGATGCGAGGCTGAGTCCCGGGTACGAGAAGGTAG
TTGAGGGCTGATTAGGAACAGAGATATTTGTGTTGTAGGTGCAGGAAGGAAGCTTGGGGA
GTCCACCATGGACGGCCTCCATACAGATCGAGAACCTGGAAACAAGGTCAGGGCCTGGAC
GAGGGTAAAGGGCCGAGCAGCCACTGAACAGAGGGGACGAGGCAGAAGGCCAGGGCCAGG
TTTCTCCTTGGCACAGCACTGCTTCATTCCTCTGGTGCTAAAAAATCAGGAGGCCCCAAG
AGCGACAGGGTAAAACTTTTGCTGCGTTGTGATTTGCATTGCCTTTCAGTGTGTTAACCC
TGTAATTGCAGTACTGAATACAACCATTCTTTTAACTGATTCTTCTCTTCCCTTTCAGTT
AGAAATCCTGTGTTCTGTCAACATTCTCCAGTTTATATTCATTGCCTTAAGACTGGACAA
GATCATCCACTGGCCCTGGCTTGTATGTAACTTTTTACATCCTTAAGAAAACTTTTTATT
TTAAAAGTCATTCATGTTCATTGTAGAAATCTCGGAAAAAGACAGACGAGCAGAGGTGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-598, gnl|bosTau2|chrX (9922485-9923082)
               

               
               4-598, gnl|Hg17|chrX (148391806-148391203)
               

               
               4-598, gnl|Mm7|chrX (65859995-65859388)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-598, gnl|bosTau2|chrX (9922485-9923082)
               

               
               4-598, gnl|Hg17|chrX (148391806-148391203)
               

               
               4-598, gnl|Mm7|chrX (65859995-65859388)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hea (0.204499)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               ecc (0.115035)

	4-598, gnl\|bosTau2\|chrX (9922485-9923082)
	4-598, gnl\|Hg17\|chrX (148391806-148391203)
	4-598, gnl\|Mm7\|chrX (65859995-65859388)