Non-Coding RNA Search

Ss1.1-recc2828c_b11.5

Sequence:


               
               CTTTTTTTTCCTTTTTTTGCCAAATGTACCAGGTAGAGGGAATTTGGTCTTTATTCTTTA
GTTCAAATGGAATATGAAGAGGCCTGACCAAAAACCTGATCAAGACACTATTGGCCTAAT
CTAAGTCGTAAAATTCAAAATATTGGCCAACTCAAAATTCTGGATTGTGGGGAGATTAAA
AATGTAAACATCCTCCTCAATAGACAATATTTATCAAGAACTTAGAGACACTGCACTTGG
GTACCTTAGAACTCTGAAGTTTTTGAAGAGTCTAATGAAAAAGGAGAGCAGGATGGCAGC
AAATGAAACAGCCTATAAGCAACCAGGAGCAAGATTTAGAACCATTAAGTTGCCAAATCA
CAGCAGAGAGGTAAAACAGGTAGCAACTTAGCATCTATTAATATGATTGCTGATAGTGTT
CAAGTTACCCACTGACTTTAATCAAATTAAACACAATTAAAAATCCAGTAGAAGGTGCTA
GAAAGACATTCAGGTGTTGAGAATTTTGGTTTTGTCACTTAAAAAATCAGAGAGTGGAAA
CTAAGAATAAATAGTTCTGAGGTTTCCTATGGCCTTTTGGTTTGGTTGTGAAGTCCTGTT
GGATCTCTGCAGATGAGCCAGGTAATATCAAGTTTCCATACTCCTTGAGAGGGGGTTTTA
GACACCATCATCACACAATGGGTTAACTCCTGCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTTTTTCCTTTTTTTGCCAAATGTACCAGGTAGAGGGAATTTGGTCTTTATTCTTTA
GTTCAAATGGAATATGAAGAGGCCTGACCAAAAACCTGATCAAGACACTATTGGCCTAAT
CTAAGTCGTAAAATTCAAAATATTGGCCAACTCAAAATTCTGGATTGTGGGGAGATTAAA
AATGTAAACATCCTCCTCAATAGACAATATTTATCAAGAACTTAGAGACACTGCACTTGG
GTACCTTAGAACTCTGAAGTTTTTGAAGAGTCTAATGAAAAAGGAGAGCAGGATGGCAGC
AAATGAAACAGCCTATAAGCAACCAGGAGCAAGATTTAGAACCATTAAGTTGCCAAATCA
CAGCAGAGAGGTAAAACAGGTAGCAACTTAGCATCTATTAATATGATTGCTGATAGTGTT
CAAGTTACCCACTGACTTTAATCAAATTAAACACAATTAAAAATCCAGTAGAAGGTGCTA
GAAAGACATTCAGGTGTTGAGAATTTTGGTTTTGTCACTTAAAAAATCAGAGAGTGGAAA
CTAAGAATAAATAGTTCTGAGGTTTCCTATGGCCTTTTGGTTTGGTTGTGAAGTCCTGTT
GGATCTCTGCAGATGAGCCAGGTAATATCAAGTTTCCATACTCCTTGAGAGGGGGTTTTA
GACACCATCATCACACAATGGGTTAACTCCTGCTGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               13-576, gnl|bosTau2|chr1 (41151132-41151680)
               

               
               13-576, gnl|Hg17|chr3 (120620879-120621406)
               

               
               13-576, gnl|Mm7|chr16 (38309752-38309219)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-576, gnl|bosTau2|chr1 (41151132-41151680)
               

               
               13-576, gnl|Hg17|chr3 (120620879-120621406)
               

               
               13-576, gnl|Mm7|chr16 (38309752-38309219)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	13-576, gnl\|bosTau2\|chr1 (41151132-41151680)
	13-576, gnl\|Hg17\|chr3 (120620879-120621406)
	13-576, gnl\|Mm7\|chr16 (38309752-38309219)