Ss1.1-recc2828c_n14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCTATTTCCTGGTGCTGAGATCCCGAGGCGATGAATCACAGTGAAAGATTCGTTTTCAT TGCAGAGTGGTATGATCCAAATGCTTCACTATTTCGACGTTATGAGCTTTTATTTTACCC AGGGGATGGATCTGTTGAAATGCATGATGTAAAGAATCATCGCACCTTTTTAAAGCGGAC CAAATATGAAGACCTTCACTTGGAAGATTTGTTTATAGGCAACAAAGTGAATGTCTTTTC TCGACAACTGGTGCTAATTGACTATGGGGATCAATATACAGCTCGTCAACTGGGCAGTAA GAAAGAAAAAACACTAGCCCTGATTAAACCAGATGCAGTATCAAAAGCTGGAGAAATAAT TGAAATAATAAACAAAGCTGGATTTACTCTAACCAAACTCAAAATGATGACGCTTTCGAG GAAAGAAGCAACTGATTTTCATATAGATCATCAGTCAAGGCCCTTTTTAAATGAGCTGAT CCAGTTTATTACAAGTGGCCCTATAATTGCTATGGAGATTTTAAGAGATGATGCTATATG CGAATGGAAAAAGCTTCTTGGACCTGCAAACTCTGGACTGGCACGTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCTATTTCCTGGTGCTGAGATCCCGAGGCGATGAATCACAGTGAAAGATTCGTTTTCAT TGCAGAGTGGTATGATCCAAATGCTTCACTATTTCGACGTTATGAGCTTTTATTTTACCC AGGGGATGGATCTGTTGAAATGCATGATGTAAAGAATCATCGCACCTTTTTAAAGCGGAC CAAATATGAAGACCTTCACTTGGAAGATTTGTTTATAGGCAACAAAGTGAATGTCTTTTC TCGACAACTGGTGCTAATTGACTATGGGGATCAATATACAGCTCGTCAACTGGGCAGTAA GAAAGAAAAAACACTAGCCCTGATTAAACCAGATGCAGTATCAAAAGCTGGAGAAATAAT TGAAATAATAAACAAAGCTGGATTTACTCTAACCAAACTCAAAATGATGACGCTTTCGAG GAAAGAAGCAACTGATTTTCATATAGATCATCAGTCAAGGCCCTTTTTAAATGAGCTGAT CCAGTTTATTACAAGTGGCCCTATAATTGCTATGGAGATTTTAAGAGATGATGCTATATG CGAATGGAAAAAGCTTCTTGGACCTGCAAACTCTGGACTGGCACGTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 142-309, gnl|bosTau2|chr16 (24733611-24733444) | |
| 142-309, gnl|canFam2|chr7 (32225100-32224923) | |
| 142-309, gnl|danRer3|chr6 (16853318-16853149) | |
| 142-309, gnl|dasNov1|scaffold_29930 (3741-3918) | |
| 142-309, gnl|fr1|chrUn (267369072-267369244) | |
| 142-309, gnl|galGal2|chr1 (77789757-77789580) | |
| 142-309, gnl|hg17|chr1 (166024003-166024180) | |
| 142-309, gnl|Hg17|chr1 (166024180-166024013) | |
| 142-309, gnl|mm7|chr1 (164298797-164298622) | |
| 142-309, gnl|Mm7|chr1 (164298620-164298787) | |
| 142-309, gnl|monDom2|scaffold_16 (20389573-20389750) | |
| 142-309, gnl|oryCun1|scaffold_211508 (894-728) | |
| 142-309, gnl|panTro1|chr1_random (30832272-30832095) | |
| 142-309, gnl|rheMac2|chr1 (199036760-199036937) | |
| 142-309, gnl|rn3|chr13 (80120208-80120033) | |
| 142-309, gnl|tetNig1|chrUn_random (76673579-76673756) | |
| 142-309, gnl|xenTro1|scaffold_143 (1678748-1678925) | |
| 310-471, gnl|bosTau2|chr16 (24719750-24719590) | |
| 310-471, gnl|Hg17|chr1 (166010976-166010817) | |
| 310-471, gnl|Mm7|chr1 (164306738-164306886) | |
| 472-588, gnl|bosTau2|chr16 (24714185-24714069) | |
| 472-588, gnl|canFam2|chr7 (32246109-32245846) | |
| 472-588, gnl|danRer3|chr6 (16862872-16862631) | |
| 472-588, gnl|dasNov1|scaffold_31245 (5463-5199) | |
| 472-588, gnl|echTel1|scaffold_280045 (40021-39761) | |
| 472-588, gnl|fr1|chrUn (267357683-267357918) | |
| 472-588, gnl|galGal2|chr1 (77799916-77799665) | |
| 472-588, gnl|hg17|chr1 (165999425-165999689) | |
| 472-588, gnl|Hg17|chr1 (165999659-165999543) | |
| 472-588, gnl|loxAfr1|scaffold_54791 (5068-5332) | |
| 472-588, gnl|mm7|chr1 (164311452-164311186) | |
| 472-588, gnl|Mm7|chr1 (164311214-164311330) | |
| 472-588, gnl|monDom2|scaffold_16 (20376714-20376961) | |
| 472-588, gnl|oryCun1|scaffold_85483 (5315-5589) | |
| 472-588, gnl|panTro1|chr1 (148264605-148264869) | |
| 472-588, gnl|rheMac2|chr1 (199013578-199013842) | |
| 472-588, gnl|rn3|chr13 (80135409-80135146) | |
| 472-588, gnl|tetNig1|chrUn_random (76672339-76672572) | |
| 472-588, gnl|xenTro1|scaffold_143 (1670974-1671230) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 142-309, gnl|bosTau2|chr16 (24733611-24733444) | |
| 142-309, gnl|canFam2|chr7 (32225100-32224923) | |
| 142-309, gnl|danRer3|chr6 (16853318-16853149) | |
| 142-309, gnl|dasNov1|scaffold_29930 (3741-3918) | |
| 142-309, gnl|fr1|chrUn (267369072-267369244) | |
| 142-309, gnl|galGal2|chr1 (77789757-77789580) | |
| 142-309, gnl|hg17|chr1 (166024003-166024180) | |
| 142-309, gnl|Hg17|chr1 (166024180-166024013) | |
| 142-309, gnl|mm7|chr1 (164298797-164298622) | |
| 142-309, gnl|Mm7|chr1 (164298620-164298787) | |
| 142-309, gnl|monDom2|scaffold_16 (20389573-20389750) | |
| 142-309, gnl|oryCun1|scaffold_211508 (894-728) | |
| 142-309, gnl|panTro1|chr1_random (30832272-30832095) | |
| 142-309, gnl|rheMac2|chr1 (199036760-199036937) | |
| 142-309, gnl|rn3|chr13 (80120208-80120033) | |
| 142-309, gnl|tetNig1|chrUn_random (76673579-76673756) | |
| 142-309, gnl|xenTro1|scaffold_143 (1678748-1678925) | |
| 310-471, gnl|bosTau2|chr16 (24719750-24719590) | |
| 310-471, gnl|Hg17|chr1 (166010976-166010817) | |
| 310-471, gnl|Mm7|chr1 (164306738-164306886) | |
| 472-588, gnl|bosTau2|chr16 (24714185-24714069) | |
| 472-588, gnl|canFam2|chr7 (32246109-32245846) | |
| 472-588, gnl|danRer3|chr6 (16862872-16862631) | |
| 472-588, gnl|dasNov1|scaffold_31245 (5463-5199) | |
| 472-588, gnl|echTel1|scaffold_280045 (40021-39761) | |
| 472-588, gnl|fr1|chrUn (267357683-267357918) | |
| 472-588, gnl|galGal2|chr1 (77799916-77799665) | |
| 472-588, gnl|hg17|chr1 (165999425-165999689) | |
| 472-588, gnl|Hg17|chr1 (165999659-165999543) | |
| 472-588, gnl|loxAfr1|scaffold_54791 (5068-5332) | |
| 472-588, gnl|mm7|chr1 (164311452-164311186) | |
| 472-588, gnl|Mm7|chr1 (164311214-164311330) | |
| 472-588, gnl|monDom2|scaffold_16 (20376714-20376961) | |
| 472-588, gnl|oryCun1|scaffold_85483 (5315-5589) | |
| 472-588, gnl|panTro1|chr1 (148264605-148264869) | |
| 472-588, gnl|rheMac2|chr1 (199013578-199013842) | |
| 472-588, gnl|rn3|chr13 (80135409-80135146) | |
| 472-588, gnl|tetNig1|chrUn_random (76672339-76672572) | |
| 472-588, gnl|xenTro1|scaffold_143 (1670974-1671230) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sme (0.305437) | |
| ecc (0.23007) | |
| eje (0.0988338) |