Ss1.1-recc2830c_d17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGTTTTGACGAAGTGTATTACGGGCAGTACCTCTCCTTTTACATGAAGCGGATCTTCTT TCTGGACGGCAGTGGTCCGCCCTTCGGCCACATGCTGCTGGCCTTAGGAGGTTATTTAGG AGGCTTCGATGGCAACTTTTTGTGGAACAGAATTGGAGCAGAATACAGCAGCAATGTGCC CGTGTGGTCTCTGCGCCTGCTGCCGGCCCTCGCGGGGGCCCTGTCGGTGCCCATGGCCTA CCAGATCATCAGGGAGCTCGGCTTCTCGCACTGCGCCGCCACAGGGGCTGCTCTGCTCAT GCTGATCGAGAACGCCCTCATCACTCAGTCCAGGCTAATGCTTTGGGAATCTCTGTTGAT ACTCGGCCCTCGAAAGGCCACCTTCCCAGCTCCCAGCTCCGCTTCTCTGTCTGCTACTGG GCCCTTCTCTGCGAGCTGGTGCTTTTGGCTGGTGCTGACGGGTGTGGCCTGCTCCTGCGC AGTTGGGTGAGTTTGGCCCACGGGGCTGAGGCGGCATCGGTAGCCTCCCCAGGGTCCCGT CTTCACCTCCCCCTTTGGCGTGTCTGCAGCATCAAATACATGGGTGCGTTCACGTACTTG CTTGTGCTTGGAGCTGGTCCTCAGGAAAGGTCCCTCAGCCCAGGCCTGGGAACAGGTGAA ACTGAGTTGGATGAAAAGAGCAGAATCTGGGTCTGTTGCGTGACGAGCCTAACTGGGCCC CTCCCCCAGGGTGTCAGACATCCGCGTGGGTGGCCCTGCAGAGTCTGCGCATCTTCTGCA GGTGAGGGATGAGGCCCGGAAAGGGGCAGCGACTTCCCCGGAGTCGCTAGGCCTCAGGAG CCGTGGCTCGGCTTCTGTGGTTCCGGAGCCCGTCCCCTCCGGCCTCTCCGAGGCCAACCT CTCCACCCTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGTTTTGACGAAGTGTATTACGGGCAGTACCTCTCCTTTTACATGAAGCGGATCTTCTT TCTGGACGGCAGTGGTCCGCCCTTCGGCCACATGCTGCTGGCCTTAGGAGGTTATTTAGG AGGCTTCGATGGCAACTTTTTGTGGAACAGAATTGGAGCAGAATACAGCAGCAATGTGCC CGTGTGGTCTCTGCGCCTGCTGCCGGCCCTCGCGGGGGCCCTGTCGGTGCCCATGGCCTA CCAGATCATCAGGGAGCTCGGCTTCTCGCACTGCGCCGCCACAGGGGCTGCTCTGCTCAT GCTGATCGAGAACGCCCTCATCACTCAGTCCAGGCTAATGCTTTGGGAATCTCTGTTGAT ACTCGGCCCTCGAAAGGCCACCTTCCCAGCTCCCAGCTCCGCTTCTCTGTCTGCTACTGG GCCCTTCTCTGCGAGCTGGTGCTTTTGGCTGGTGCTGACGGGTGTGGCCTGCTCCTGCGC AGTTGGGTGAGTTTGGCCCACGGGGCTGAGGCGGCATCGGTAGCCTCCCCAGGGTCCCGT CTTCACCTCCCCCTTTGGCGTGTCTGCAGCATCAAATACATGGGTGCGTTCACGTACTTG CTTGTGCTTGGAGCTGGTCCTCAGGAAAGGTCCCTCAGCCCAGGCCTGGGAACAGGTGAA ACTGAGTTGGATGAAAAGAGCAGAATCTGGGTCTGTTGCGTGACGAGCCTAACTGGGCCC CTCCCCCAGGGTGTCAGACATCCGCGTGGGTGGCCCTGCAGAGTCTGCGCATCTTCTGCA GGTGAGGGATGAGGCCCGGAAAGGGGCAGCGACTTCCCCGGAGTCGCTAGGCCTCAGGAG CCGTGGCTCGGCTTCTGTGGTTCCGGAGCCCGTCCCCTCCGGCCTCTCCGAGGCCAACCT CTCCACCCTCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 3-112, gnl|bosTau2|chr11 (82077985-82078094) | |
| 3-112, gnl|canFam2|chr9 (55972807-55972697) | |
| 3-112, gnl|danRer3|chr5 (57508257-57508367) | |
| 3-112, gnl|dasNov1|scaffold_8624 (23445-23335) | |
| 3-112, gnl|echTel1|scaffold_298065 (3223-3113) | |
| 3-112, gnl|fr1|chrUn (308965409-308965299) | |
| 3-112, gnl|galGal2|chr17 (4119076-4118966) | |
| 3-112, gnl|hg17|chr9 (131411054-131411164) | |
| 3-112, gnl|Hg17|chr9 (131411054-131411163) | |
| 3-112, gnl|loxAfr1|scaffold_8305 (57249-57359) | |
| 3-112, gnl|mm7|chr2 (32247737-32247847) | |
| 3-112, gnl|Mm7|chr2 (32247737-32247846) | |
| 3-112, gnl|monDom2|scaffold_51 (7026592-7026702) | |
| 3-112, gnl|oryCun1|scaffold_143833 (443-333) | |
| 3-112, gnl|panTro1|chr11 (116290606-116290716) | |
| 3-112, gnl|rheMac2|chr15 (7184749-7184639) | |
| 3-112, gnl|rn3|chr3 (11248573-11248683) | |
| 3-112, gnl|tetNig1|chrUn_random (82302442-82302332) | |
| 3-112, gnl|xenTro1|scaffold_191 (645644-645754) | |
| 159-317, gnl|bosTau2|chr11 (82079074-82079232) | |
| 159-317, gnl|Hg17|chr9 (131412306-131412464) | |
| 159-317, gnl|Mm7|chr2 (32248961-32249119) | |
| 380-616, gnl|bosTau2|chr11 (82080345-82080578) | |
| 380-616, gnl|Hg17|chr9 (131414637-131414890) | |
| 380-616, gnl|Mm7|chr2 (32250726-32250976) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-112, gnl|bosTau2|chr11 (82077985-82078094) | |
| 3-112, gnl|canFam2|chr9 (55972807-55972697) | |
| 3-112, gnl|danRer3|chr5 (57508257-57508367) | |
| 3-112, gnl|dasNov1|scaffold_8624 (23445-23335) | |
| 3-112, gnl|echTel1|scaffold_298065 (3223-3113) | |
| 3-112, gnl|fr1|chrUn (308965409-308965299) | |
| 3-112, gnl|galGal2|chr17 (4119076-4118966) | |
| 3-112, gnl|hg17|chr9 (131411054-131411164) | |
| 3-112, gnl|Hg17|chr9 (131411054-131411163) | |
| 3-112, gnl|loxAfr1|scaffold_8305 (57249-57359) | |
| 3-112, gnl|mm7|chr2 (32247737-32247847) | |
| 3-112, gnl|Mm7|chr2 (32247737-32247846) | |
| 3-112, gnl|monDom2|scaffold_51 (7026592-7026702) | |
| 3-112, gnl|oryCun1|scaffold_143833 (443-333) | |
| 3-112, gnl|panTro1|chr11 (116290606-116290716) | |
| 3-112, gnl|rheMac2|chr15 (7184749-7184639) | |
| 3-112, gnl|rn3|chr3 (11248573-11248683) | |
| 3-112, gnl|tetNig1|chrUn_random (82302442-82302332) | |
| 3-112, gnl|xenTro1|scaffold_191 (645644-645754) | |
| 159-317, gnl|bosTau2|chr11 (82079074-82079232) | |
| 159-317, gnl|Hg17|chr9 (131412306-131412464) | |
| 159-317, gnl|Mm7|chr2 (32248961-32249119) | |
| 380-616, gnl|bosTau2|chr11 (82080345-82080578) | |
| 380-616, gnl|Hg17|chr9 (131414637-131414890) | |
| 380-616, gnl|Mm7|chr2 (32250726-32250976) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.150489) | |
| ecc (0.115035) |