Non-Coding RNA Search

Ss1.1-recc2831c_b18.5

Sequence:


               
               AAACAACCTAAATGTCCATCGACAGAGGAGTGGATAAAGGAAATGTGCTGTATATACACA
ATGGAATATTACTCAGCCATTAAAAGGAAAGAAAGAACAGCATTTGCAGCAACATGGGTG
GACATAGAAATGATCATGCTAAGTGAAGTTGGTCCAACAGTGAGACACCAACATCAAATT
CTATCACTTACATGTGGAATCTAAAAAAAGAAAACCATGAGCTTCTTTGCAGAACATGTA
CTGACTCACAGGCTTTGAAAAACTTATGGTTTCCAAATGAGACACTTTGGGGTGTGGGGG
ATGCGCTGGGGGTTTGGGATGGAAATGCTATAAAATTGGGTTGTGATGATTGTTGTACAA
CTATAAATGTAATAAAATTCATTGAGTAATAATAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACAACCTAAATGTCCATCGACAGAGGAGTGGATAAAGGAAATGTGCTGTATATACACA
ATGGAATATTACTCAGCCATTAAAAGGAAAGAAAGAACAGCATTTGCAGCAACATGGGTG
GACATAGAAATGATCATGCTAAGTGAAGTTGGTCCAACAGTGAGACACCAACATCAAATT
CTATCACTTACATGTGGAATCTAAAAAAAGAAAACCATGAGCTTCTTTGCAGAACATGTA
CTGACTCACAGGCTTTGAAAAACTTATGGTTTCCAAATGAGACACTTTGGGGTGTGGGGG
ATGCGCTGGGGGTTTGGGATGGAAATGCTATAAAATTGGGTTGTGATGATTGTTGTACAA
CTATAAATGTAATAAAATTCATTGAGTAATAATAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-261, gnl|bosTau2|chr1 (35162095-35162356)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-261, gnl|bosTau2|chr1 (35162095-35162356)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               cte (0.29274)
               

               
               fhi (0.169578)
               

               
               spl (0.143184)
               

               
               ova (0.129132)
               

               
               pgl (0.118483)
               

               
               ecc (0.115035)
               

               
               spc (0.113366)
               

               
               eje (0.0988338)

Expressed library(ies): 8 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               fhi (0.169578)
               

               
               spl (0.143184)
               

               
               ova (0.129132)
               

               
               pgl (0.118483)
               

               
               ecc (0.115035)
               

               
               spc (0.113366)
               

               
               eje (0.0988338)

	cte (0.29274)
	fhi (0.169578)
	spl (0.143184)
	ova (0.129132)
	pgl (0.118483)
	ecc (0.115035)
	spc (0.113366)
	eje (0.0988338)