Non-Coding RNA Search

Ss1.1-recc2831c_j13.5

Sequence:


               
               GCGTCCGAGGCGGCTGGCCCCGTGTGGCAGCGATTGGCTGTTCGCGTGCTGGCTGCGTAC
AAGCAGCGGGCCCGGCCTGTGCGCCGCGGCAGCCAAGACGCCTGGGTGCCCCGCGCCGAC
CTGACCTGCGGCTGCCTGCGCCTGCAGCCCGTCACCCACTACCTGCTGCTGGGCAGCGCG
GCTGGCGGCCCCGACCCCACGCGCCTGGTCCTCGACCGCCACGGCCTCGCGTTACCTTGG
AGGCCGCACTGGGCCCGGCCGCTGCGGCGGCTGCAGCAGGAGGAACGCGCCGGGGGCTGC
CGCGGACTGGGGCCCCCGACCCCAACTCCGAGCCCCGAACCCCCAGGTGGCCTCGAACGC
CAAGGAAAGCACTAGAAACAAGGACCGCGTGAAGCTTTCTACCTCAATGGCGGATCCCTC
AGCGAGCCAATCAGACTCCGCAGAGCACCCGATGTCACAGGCATGCGCCAGCTCCAACCA
GGCGTGAGGGACGTTTAGTCAAAGGCCACACACTGCAAGCAGGACCTTTGGTCTCTGGCT
AGGACACGTGACCTGTGACCTACGTAAGGGCCTCCTCAATAAAGCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGTCCGAGGCGGCTGGCCCCGTGTGGCAGCGATTGGCTGTTCGCGTGCTGGCTGCGTAC
AAGCAGCGGGCCCGGCCTGTGCGCCGCGGCAGCCAAGACGCCTGGGTGCCCCGCGCCGAC
CTGACCTGCGGCTGCCTGCGCCTGCAGCCCGTCACCCACTACCTGCTGCTGGGCAGCGCG
GCTGGCGGCCCCGACCCCACGCGCCTGGTCCTCGACCGCCACGGCCTCGCGTTACCTTGG
AGGCCGCACTGGGCCCGGCCGCTGCGGCGGCTGCAGCAGGAGGAACGCGCCGGGGGCTGC
CGCGGACTGGGGCCCCCGACCCCAACTCCGAGCCCCGAACCCCCAGGTGGCCTCGAACGC
CAAGGAAAGCACTAGAAACAAGGACCGCGTGAAGCTTTCTACCTCAATGGCGGATCCCTC
AGCGAGCCAATCAGACTCCGCAGAGCACCCGATGTCACAGGCATGCGCCAGCTCCAACCA
GGCGTGAGGGACGTTTAGTCAAAGGCCACACACTGCAAGCAGGACCTTTGGTCTCTGGCT
AGGACACGTGACCTGTGACCTACGTAAGGGCCTCCTCAATAAAGCTTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61876632|ref|XP_613792.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61876632|ref|XP_613792.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-584, gnl|bosTau2|chr18 (50526895-50527479)
               

               
               1-584, gnl|Hg17|chr19 (53857090-53856493)
               

               
               1-584, gnl|Mm7|chr7 (41870326-41870834)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-584, gnl|bosTau2|chr18 (50526895-50527479)
               

               
               1-584, gnl|Hg17|chr19 (53857090-53856493)
               

               
               1-584, gnl|Mm7|chr7 (41870326-41870834)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               col (0.195008)
               

               
               hyp (0.142837)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               hyp (0.142837)
               

               
               ecc (0.115035)

	1-584, gnl\|bosTau2\|chr18 (50526895-50527479)
	1-584, gnl\|Hg17\|chr19 (53857090-53856493)
	1-584, gnl\|Mm7\|chr7 (41870326-41870834)