Ss1.1-recc2831c_l23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAATTTGGGGTTATTAAGAGGCCTGTGTTAGAACTTATAGATGCATGGAGAGTCATTCTG AAATAATTGTGCTTTAAGCAGGGTGTAAAAGATTATCATGATAAAGCAGTTCACTTTGTG AAGGAAAAACAGTTTTTGGAAGATTTGCTTTTGTTAGCAAAATTTGATAGGTTTTTTTCA ATTTAATTGTAGCCTGACATTTTAAGCTTAGAACAGTTTGGGGGTTCATTTTTTTGGTAT TGTGATTTAAGAGGGATTGGATAGTACTTTTTCTTAGTCTCTTTCACGACCAAGAAGCAG CCGATCAAAGTCCAGATCGCCATCTCCCAAAAGAAGGTAAGCTAAATAATTTGTTGCCAA ATCTTAATTGTCAAGTGTGGCCCTTGCAGATGCAGAATTTGTTTACTGCCTACTTTGAAG GCTTTGAGCTCTTTGGAGAATTGGTGCTATATAAAAATATTAGGTACAGTTTCTTAGAGA ATCAAAATAACCTAGAGTTCAAGTAGTTGTTCTTTATAAGTTTTATAATTTCAGCAAAGA GGTCATTAAGCAGCCTTATGAAATTTTTTTAGATCTGCTGTAGTAACTTACTATCCTTGG CCACCTTTGAATTTGTTGAAACCTGAGTTTTGCCCTGACATGTATGTGAGAAGACATTTA AGTTTCAGTAGACACTAATTGGTTCCAAACTTCATGTCTTTTTTTTCCCTTTTAGTCGTT CCCCATCAGGAAGTCCAAGAAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAATTTGGGGTTATTAAGAGGCCTGTGTTAGAACTTATAGATGCATGGAGAGTCATTCTG AAATAATTGTGCTTTAAGCAGGGTGTAAAAGATTATCATGATAAAGCAGTTCACTTTGTG AAGGAAAAACAGTTTTTGGAAGATTTGCTTTTGTTAGCAAAATTTGATAGGTTTTTTTCA ATTTAATTGTAGCCTGACATTTTAAGCTTAGAACAGTTTGGGGGTTCATTTTTTTGGTAT TGTGATTTAAGAGGGATTGGATAGTACTTTTTCTTAGTCTCTTTCACGACCAAGAAGCAG CCGATCAAAGTCCAGATCGCCATCTCCCAAAAGAAGGTAAGCTAAATAATTTGTTGCCAA ATCTTAATTGTCAAGTGTGGCCCTTGCAGATGCAGAATTTGTTTACTGCCTACTTTGAAG GCTTTGAGCTCTTTGGAGAATTGGTGCTATATAAAAATATTAGGTACAGTTTCTTAGAGA ATCAAAATAACCTAGAGTTCAAGTAGTTGTTCTTTATAAGTTTTATAATTTCAGCAAAGA GGTCATTAAGCAGCCTTATGAAATTTTTTTAGATCTGCTGTAGTAACTTACTATCCTTGG CCACCTTTGAATTTGTTGAAACCTGAGTTTTGCCCTGACATGTATGTGAGAAGACATTTA AGTTTCAGTAGACACTAATTGGTTCCAAACTTCATGTCTTTTTTTTCCCTTTTAGTCGTT CCCCATCAGGAAGTCCAAGAAGAA |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 124-478, gnl|bosTau2|chr11 (16015353-16015701) | |
| 124-478, gnl|Hg17|chr2 (38885149-38884797) | |
| 124-478, gnl|Mm7|chr17 (78498077-78497690) | |
| 626-744, gnl|bosTau2|chr11 (16015808-16015916) | |
| 626-744, gnl|canFam2|chr17 (33912680-33912774) | |
| 626-744, gnl|dasNov1|scaffold_97875 (628-738) | |
| 626-744, gnl|echTel1|scaffold_288610 (40373-40467) | |
| 626-744, gnl|fr1|chrUn (98424824-98424746) | |
| 626-744, gnl|galGal2|chrUn (139354028-139353956) | |
| 626-744, gnl|hg17|chr2 (38883921-38884015) | |
| 626-744, gnl|Hg17|chr2 (38884042-38883952) | |
| 626-744, gnl|loxAfr1|scaffold_32197 (4513-4419) | |
| 626-744, gnl|mm7|chr17 (78497256-78497350) | |
| 626-744, gnl|Mm7|chr17 (78497435-78497287) | |
| 626-744, gnl|monDom2|scaffold_23 (41975131-41975229) | |
| 626-744, gnl|oryCun1|scaffold_156554 (1915-2008) | |
| 626-744, gnl|panTro1|chr12 (40376150-40376244) | |
| 626-744, gnl|rheMac2|chr13 (38731410-38731504) | |
| 626-744, gnl|rn3|chr6 (3098730-3098824) | |
| 626-744, gnl|xenTro1|scaffold_41 (546226-546321) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 124-478, gnl|bosTau2|chr11 (16015353-16015701) | |
| 124-478, gnl|Hg17|chr2 (38885149-38884797) | |
| 124-478, gnl|Mm7|chr17 (78498077-78497690) | |
| 626-744, gnl|bosTau2|chr11 (16015808-16015916) | |
| 626-744, gnl|canFam2|chr17 (33912680-33912774) | |
| 626-744, gnl|dasNov1|scaffold_97875 (628-738) | |
| 626-744, gnl|echTel1|scaffold_288610 (40373-40467) | |
| 626-744, gnl|fr1|chrUn (98424824-98424746) | |
| 626-744, gnl|galGal2|chrUn (139354028-139353956) | |
| 626-744, gnl|hg17|chr2 (38883921-38884015) | |
| 626-744, gnl|Hg17|chr2 (38884042-38883952) | |
| 626-744, gnl|loxAfr1|scaffold_32197 (4513-4419) | |
| 626-744, gnl|mm7|chr17 (78497256-78497350) | |
| 626-744, gnl|Mm7|chr17 (78497435-78497287) | |
| 626-744, gnl|monDom2|scaffold_23 (41975131-41975229) | |
| 626-744, gnl|oryCun1|scaffold_156554 (1915-2008) | |
| 626-744, gnl|panTro1|chr12 (40376150-40376244) | |
| 626-744, gnl|rheMac2|chr13 (38731410-38731504) | |
| 626-744, gnl|rn3|chr6 (3098730-3098824) | |
| 626-744, gnl|xenTro1|scaffold_41 (546226-546321) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| lun (0.150489) | |
| lin (0.145603) | |
| ecc (0.115035) | |
| eje (0.0988338) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.150489) | |
| lin (0.145603) | |
| ecc (0.115035) | |
| eje (0.0988338) |