Non-Coding RNA Search

Ss1.1-recc2832c_g22.5

Sequence:


               
               TGTTTATTATACATGGTTGCAAATACGCAGGCTGTGTTGTTCAATCCAGCCACACCTTAT
AAGCCAGGTGGCTGGGTCGCGTATGGCTTTGATGCAGTGAGAGCCGTGGATGTGACCAAG
CCGCCTTGTGCCAGCTGACAAATGCCAAATAGAAAACCACTTGGCCATTTCTTTCCATGT
TCACTAAAACCTCTATCGCCTGTGATTCTTAATCTCTTTCGCAAACCTTTCCGTCTCTGC
TAGCTCCTTCCTGATGAGCGTATTACAGCAGAAATCGTTTTACCGTGAGTGCCCGGCAGA
GGAATTATTTGCCGAGAGGCCGCAGAGTTCTGTAGATTTGGGAGAAGCGTGTGAGCTGAG
CACTGGCTGAGGACCTCAGGTACCCTCCCTTTATCACTCAGATGGTTTGCACTACTCCAG
CGGCACCCTGCAGGCTGGAGGTGAGATGTTCCTGGTTTAAAGCCTTTCAGTATTTGTTTT
GATGTAAGTCTGTGTGGTTTGGGGGAAAACGAGTCTGTAAACATTAATAGTTGATTTGGG
GTTTGTCTTTGATGCTTTCTATCTGCAATTATCGTCATGTATATTTAAATGTCTGTTAGA
GAAAAACCCACGCCCACTGTCCTGTAAATTTCTCTCAGTGTCCAGACTCTGTGTAATCAC
ATTTTAATTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTTATTATACATGGTTGCAAATACGCAGGCTGTGTTGTTCAATCCAGCCACACCTTAT
AAGCCAGGTGGCTGGGTCGCGTATGGCTTTGATGCAGTGAGAGCCGTGGATGTGACCAAG
CCGCCTTGTGCCAGCTGACAAATGCCAAATAGAAAACCACTTGGCCATTTCTTTCCATGT
TCACTAAAACCTCTATCGCCTGTGATTCTTAATCTCTTTCGCAAACCTTTCCGTCTCTGC
TAGCTCCTTCCTGATGAGCGTATTACAGCAGAAATCGTTTTACCGTGAGTGCCCGGCAGA
GGAATTATTTGCCGAGAGGCCGCAGAGTTCTGTAGATTTGGGAGAAGCGTGTGAGCTGAG
CACTGGCTGAGGACCTCAGGTACCCTCCCTTTATCACTCAGATGGTTTGCACTACTCCAG
CGGCACCCTGCAGGCTGGAGGTGAGATGTTCCTGGTTTAAAGCCTTTCAGTATTTGTTTT
GATGTAAGTCTGTGTGGTTTGGGGGAAAACGAGTCTGTAAACATTAATAGTTGATTTGGG
GTTTGTCTTTGATGCTTTCTATCTGCAATTATCGTCATGTATATTTAAATGTCTGTTAGA
GAAAAACCCACGCCCACTGTCCTGTAAATTTCTCTCAGTGTCCAGACTCTGTGTAATCAC
ATTTTAATTGCC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               324-672, gnl|bosTau2|chr3 (46760722-46761074)
               

               
               324-672, gnl|Hg17|chrX (149352541-149352920)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               324-672, gnl|bosTau2|chr3 (46760722-46761074)
               

               
               324-672, gnl|Hg17|chrX (149352541-149352920)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

Help | Less info


               
               fbs (0.175346)
               

               
               cki (0.165235)
               

               
               hlv (0.139256)
               

               
               ese (0.126502)
               

               
               ecc (0.115035)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               cki (0.165235)
               

               
               hlv (0.139256)
               

               
               ese (0.126502)
               

               
               ecc (0.115035)

	324-672, gnl\|bosTau2\|chr3 (46760722-46761074)
	324-672, gnl\|Hg17\|chrX (149352541-149352920)

	fbs (0.175346)
	cki (0.165235)
	hlv (0.139256)
	ese (0.126502)
	ecc (0.115035)