Non-Coding RNA Search

Ss1.1-recc2832c_h22.5

Sequence:


               
               TGCACCCTGTGGGGGCTGGCTGCCAGGTCTTTGAAGGCAGACCCAAGCTGGCTGCATGGC
GCCAGCGCGTGGAGGTGGCAATCGGGGAGGTCCTCTTCCAGGAGGCCCATGAGGTCATTC
TGAAGGCCAAGGACTCTCAGCCTGTAGACCCCACCCTAAAGCAGAAGCTGCTGCCAAAGG
TGCTGGCCATGATCCAGTGAGCCGGGAAGCCTCCCCCCTGCTCTGCCCTGGATTTCCAGT
GTCCACAGGAGGCAGACTCAGTGACTTGCCTGAGTCTCACTGCACCTCTGCTCCCAGGGC
CAGGTCCACCCTCCCCACCTCCTCCCATCTTCCACAGCTGCCTGAAAAGCACAATGAGAA
TGGCACACCCAGACCGTCTCTCCTTTAATCAATGCATTTTGTTTTCAATTTGGAAAATAA
ACCTGAGCTTAGCTTGAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCACCCTGTGGGGGCTGGCTGCCAGGTCTTTGAAGGCAGACCCAAGCTGGCTGCATGGC
GCCAGCGCGTGGAGGTGGCAATCGGGGAGGTCCTCTTCCAGGAGGCCCATGAGGTCATTC
TGAAGGCCAAGGACTCTCAGCCTGTAGACCCCACCCTAAAGCAGAAGCTGCTGCCAAAGG
TGCTGGCCATGATCCAGTGAGCCGGGAAGCCTCCCCCCTGCTCTGCCCTGGATTTCCAGT
GTCCACAGGAGGCAGACTCAGTGACTTGCCTGAGTCTCACTGCACCTCTGCTCCCAGGGC
CAGGTCCACCCTCCCCACCTCCTCCCATCTTCCACAGCTGCCTGAAAAGCACAATGAGAA
TGGCACACCCAGACCGTCTCTCCTTTAATCAATGCATTTTGTTTTCAATTTGGAAAATAA
ACCTGAGCTTAGCTTGAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61824108|ref|XP_595900.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61824108|ref|XP_595900.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-437, gnl|bosTau2|chr17 (41551083-41551528)
               

               
               3-437, gnl|Hg17|chr22 (22701174-22700707)
               

               
               3-437, gnl|Mm7|chr10 (75439887-75439471)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-437, gnl|bosTau2|chr17 (41551083-41551528)
               

               
               3-437, gnl|Hg17|chr22 (22701174-22700707)
               

               
               3-437, gnl|Mm7|chr10 (75439887-75439471)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cag (0.302389)
               

               
               fhi (0.169578)
               

               
               cli (0.152812)
               

               
               ecc (0.115035)
               

               
               eje (0.0988338)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.302389)
               

               
               fhi (0.169578)
               

               
               cli (0.152812)
               

               
               ecc (0.115035)
               

               
               eje (0.0988338)

	3-437, gnl\|bosTau2\|chr17 (41551083-41551528)
	3-437, gnl\|Hg17\|chr22 (22701174-22700707)
	3-437, gnl\|Mm7\|chr10 (75439887-75439471)

	cag (0.302389)
	fhi (0.169578)
	cli (0.152812)
	ecc (0.115035)
	eje (0.0988338)