Non-Coding RNA Search

Ss1.1-recc2833c_d11.5

Sequence:


               
               TGTGTTCCTCCCGACCTGGGTGCCTTCTGGAACAAGAGGTGTGTCTCTCACCCTTCCCCC
CCACCGGGTACCTCACACACGGTCCACATGCAGTCAGTGTATCAAGAGTGAACAAACGAT
TCTCACGCACCAACATCCTGAAGTCCTGCCAGGGCGCAGCGCTGGCTTCCAGGCAGCGTC
AGGATGCGTGTGGGCACCCCGTGCAGGTACCGTATAACAGGCATCAGCCTTTCTGTTTTA
AAGCAGATCGACCCATCTGAGCAAAAGACTCTGGCCAATCTGCCGTGGATTGTGGAGCCA
GGACAGGAGGCCAAGCGGGGGATAAATACCAAGTATGAGACCACGATTTTCTGATACTCA
CCGTCCTCCCGTCCTCGCGGTGCCTTGCACGCCGAGCAGTCCCGGAGCAGGCTTTCCACC
CAGCCCAGGAGGAAGAACTGCTCTGTTTGTGTGGCCTTGTCACAGGCGAGAGGCCGCTGG
CCGTTCCTGGGGACGTTCTTTCTGCACAGTGACAGAAAGTGCAACCAAGACTTTCCAGCC
GTAACCCCTGAAAGGCACGAGTTGAGATTTTCAGCTGACTGTCCTGACTCCCTTCCCTGC
TGCCACCCGAGGTATTTCTGATGACTCTGCCCCAACACTTGCTTTGCTGTATTTGGGGAT
AATACCTTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGTTCCTCCCGACCTGGGTGCCTTCTGGAACAAGAGGTGTGTCTCTCACCCTTCCCCC
CCACCGGGTACCTCACACACGGTCCACATGCAGTCAGTGTATCAAGAGTGAACAAACGAT
TCTCACGCACCAACATCCTGAAGTCCTGCCAGGGCGCAGCGCTGGCTTCCAGGCAGCGTC
AGGATGCGTGTGGGCACCCCGTGCAGGTACCGTATAACAGGCATCAGCCTTTCTGTTTTA
AAGCAGATCGACCCATCTGAGCAAAAGACTCTGGCCAATCTGCCGTGGATTGTGGAGCCA
GGACAGGAGGCCAAGCGGGGGATAAATACCAAGTATGAGACCACGATTTTCTGATACTCA
CCGTCCTCCCGTCCTCGCGGTGCCTTGCACGCCGAGCAGTCCCGGAGCAGGCTTTCCACC
CAGCCCAGGAGGAAGAACTGCTCTGTTTGTGTGGCCTTGTCACAGGCGAGAGGCCGCTGG
CCGTTCCTGGGGACGTTCTTTCTGCACAGTGACAGAAAGTGCAACCAAGACTTTCCAGCC
GTAACCCCTGAAAGGCACGAGTTGAGATTTTCAGCTGACTGTCCTGACTCCCTTCCCTGC
TGCCACCCGAGGTATTTCTGATGACTCTGCCCCAACACTTGCTTTGCTGTATTTGGGGAT
AATACCTTAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               8-672, gnl|bosTau2|chr5 (39252278-39251607)
               

               
               8-672, gnl|Hg17|chr12 (97642341-97641624)
               

               
               8-672, gnl|Mm7|chr10 (90528376-90528988)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-672, gnl|bosTau2|chr5 (39252278-39251607)
               

               
               8-672, gnl|Hg17|chr12 (97642341-97641624)
               

               
               8-672, gnl|Mm7|chr10 (90528376-90528988)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	8-672, gnl\|bosTau2\|chr5 (39252278-39251607)
	8-672, gnl\|Hg17\|chr12 (97642341-97641624)
	8-672, gnl\|Mm7\|chr10 (90528376-90528988)