Non-Coding RNA Search

Ss1.1-recc2833c_e6.5

Sequence:


               
               GGCCGGCAATCACCGCTGGTGAGGGCTATTGGAAGAGTGGCCAGCCGGAGGGGGGGGGGG
CTGAGGGGGTGGGTGGAGTTGGGCACAAAAACTACTGAGTCTAAGTAGAATAGGTGGGGG
GAGGGTCGTGTTTTCTGTAGCGGTTGTATTTATGTAACTAGGATTTAGGTTTTGTATCTT
GCTAAGTTTTGTTACATTTAATATACTGTTAAATTGATGTTTGTAAATGAGATTCGTATA
CTTTTTCCTGTAGGATTTTGTTGTAAAGTTTTGCTGGTTTTGTAAAATGAATTGAAAAAC
ATTTTATTCTGTGATCTTGAACAAATGATGCAACAGTGAATGCTGTACTTAGGTAGTTTA
AAGGAACTCAGCAGTATGATGATCTGGTACCAGAAAAAAAATAACTGATTAGTATCTAGC
TTCGCAACACTTTTTTGTGTATTGTATAAAGAAAAAAGACTGACATGTAACTCTATTTGC
TTAGTTATTATAGTATCTGGGGGGGGGAATGCAATAAATTAGAAGTATAACCTGGTATAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCGGCAATCACCGCTGGTGAGGGCTATTGGAAGAGTGGCCAGCCGGAGGGGGGGGGGG
CTGAGGGGGTGGGTGGAGTTGGGCACAAAAACTACTGAGTCTAAGTAGAATAGGTGGGGG
GAGGGTCGTGTTTTCTGTAGCGGTTGTATTTATGTAACTAGGATTTAGGTTTTGTATCTT
GCTAAGTTTTGTTACATTTAATATACTGTTAAATTGATGTTTGTAAATGAGATTCGTATA
CTTTTTCCTGTAGGATTTTGTTGTAAAGTTTTGCTGGTTTTGTAAAATGAATTGAAAAAC
ATTTTATTCTGTGATCTTGAACAAATGATGCAACAGTGAATGCTGTACTTAGGTAGTTTA
AAGGAACTCAGCAGTATGATGATCTGGTACCAGAAAAAAAATAACTGATTAGTATCTAGC
TTCGCAACACTTTTTTGTGTATTGTATAAAGAAAAAAGACTGACATGTAACTCTATTTGC
TTAGTTATTATAGTATCTGGGGGGGGGAATGCAATAAATTAGAAGTATAACCTGGTATAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               19-537, gnl|bosTau2|chr1 (53760209-53760734)
               

               
               19-537, gnl|Hg17|chr3 (185911432-185910883)
               

               
               19-537, gnl|Mm7|chr16 (20981986-20981361)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-537, gnl|bosTau2|chr1 (53760209-53760734)
               

               
               19-537, gnl|Hg17|chr3 (185911432-185910883)
               

               
               19-537, gnl|Mm7|chr16 (20981986-20981361)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.23007)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.23007)

	19-537, gnl\|bosTau2\|chr1 (53760209-53760734)
	19-537, gnl\|Hg17\|chr3 (185911432-185910883)
	19-537, gnl\|Mm7\|chr16 (20981986-20981361)