Ss1.1-recc2833c_k20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGCGCTTGCTCCGCTGCCCCCGCTGCCTCCGCAGTTTAAGAGCATTCAGCATCATCTGA GGACGGCTCAGGAGCATGACAAGCGGGACCCTGTGGTGGCATATTACTGTCGTTTATATG CAATGCAAACTGGAATGAAGATTGATAGTAAAACTCCTGAATGTCGTAAATTTTTATCAA AGCTGATGGATCAGTTAGAAGCTCTTAAGAAACAGTTGGGTGACAATGAAGCTGTTACTC AAGAAATAGTTGGTTCTGCCCACTTGGAGAATTATGCTTTGAAAATGTTTTTATATGCAG ATAATGAAGATCGGGCTGGGCGATTTCATAAAAACATGATCAAGTCCTTCTATACTGCAA GTCTTTTAATAGATGTCATAACAGTGTTTGGAGAACTCACTGATGAAAATGTGAAACACA GAAAGTATGCAAGGTGGAAGGCAACATATATTCATAATTGTTTAAAGAATGGAGAGACTC CTCAAGCAGGTCCTGTGGGCATTGAAGAAGATAATGACATTGAAGAAAATGAAGATGCTG GAGCAACCTCTCTGCCCACTCAGCCACCTCAGCCATCATCTTCCACTTATGACCCAGGCA ACATGCCATCGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGCGCTTGCTCCGCTGCCCCCGCTGCCTCCGCAGTTTAAGAGCATTCAGCATCATCTGA GGACGGCTCAGGAGCATGACAAGCGGGACCCTGTGGTGGCATATTACTGTCGTTTATATG CAATGCAAACTGGAATGAAGATTGATAGTAAAACTCCTGAATGTCGTAAATTTTTATCAA AGCTGATGGATCAGTTAGAAGCTCTTAAGAAACAGTTGGGTGACAATGAAGCTGTTACTC AAGAAATAGTTGGTTCTGCCCACTTGGAGAATTATGCTTTGAAAATGTTTTTATATGCAG ATAATGAAGATCGGGCTGGGCGATTTCATAAAAACATGATCAAGTCCTTCTATACTGCAA GTCTTTTAATAGATGTCATAACAGTGTTTGGAGAACTCACTGATGAAAATGTGAAACACA GAAAGTATGCAAGGTGGAAGGCAACATATATTCATAATTGTTTAAAGAATGGAGAGACTC CTCAAGCAGGTCCTGTGGGCATTGAAGAAGATAATGACATTGAAGAAAATGAAGATGCTG GAGCAACCTCTCTGCCCACTCAGCCACCTCAGCCATCATCTTCCACTTATGACCCAGGCA ACATGCCATCGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 3-110, gnl|bosTau2|chr9 (45596359-45596252) | |
| 3-110, gnl|Hg17|chr6 (142510124-142510231) | |
| 3-110, gnl|Mm7|chr10 (14407748-14407641) | |
| 204-331, gnl|bosTau2|chr9 (45573112-45572985) | |
| 204-331, gnl|canFam2|chr1 (36896380-36896538) | |
| 204-331, gnl|echTel1|scaffold_277515 (6977-6818) | |
| 204-331, gnl|fr1|chrUn (209845746-209845608) | |
| 204-331, gnl|galGal2|chr3 (51961649-51961485) | |
| 204-331, gnl|hg17|chr6 (142532362-142532521) | |
| 204-331, gnl|Hg17|chr6 (142532380-142532507) | |
| 204-331, gnl|loxAfr1|scaffold_8300 (7704-7866) | |
| 204-331, gnl|mm7|chr10 (14387321-14387162) | |
| 204-331, gnl|Mm7|chr10 (14387301-14387174) | |
| 204-331, gnl|monDom2|scaffold_0 (66110628-66110471) | |
| 204-331, gnl|oryCun1|scaffold_214174 (43146-43305) | |
| 204-331, gnl|panTro1|chr5 (145433853-145434012) | |
| 204-331, gnl|rheMac2|chr4 (121539217-121539058) | |
| 204-331, gnl|rn3|chr1 (9539020-9538861) | |
| 204-331, gnl|tetNig1|chrUn_random (157214055-157214189) | |
| 204-331, gnl|xenTro1|scaffold_41 (2768863-2768701) | |
| 408-516, gnl|bosTau2|chr9 (45546604-45546496) | |
| 408-516, gnl|Hg17|chr6 (142552256-142552364) | |
| 408-516, gnl|Mm7|chr10 (14378335-14378227) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-110, gnl|bosTau2|chr9 (45596359-45596252) | |
| 3-110, gnl|Hg17|chr6 (142510124-142510231) | |
| 3-110, gnl|Mm7|chr10 (14407748-14407641) | |
| 204-331, gnl|bosTau2|chr9 (45573112-45572985) | |
| 204-331, gnl|canFam2|chr1 (36896380-36896538) | |
| 204-331, gnl|echTel1|scaffold_277515 (6977-6818) | |
| 204-331, gnl|fr1|chrUn (209845746-209845608) | |
| 204-331, gnl|galGal2|chr3 (51961649-51961485) | |
| 204-331, gnl|hg17|chr6 (142532362-142532521) | |
| 204-331, gnl|Hg17|chr6 (142532380-142532507) | |
| 204-331, gnl|loxAfr1|scaffold_8300 (7704-7866) | |
| 204-331, gnl|mm7|chr10 (14387321-14387162) | |
| 204-331, gnl|Mm7|chr10 (14387301-14387174) | |
| 204-331, gnl|monDom2|scaffold_0 (66110628-66110471) | |
| 204-331, gnl|oryCun1|scaffold_214174 (43146-43305) | |
| 204-331, gnl|panTro1|chr5 (145433853-145434012) | |
| 204-331, gnl|rheMac2|chr4 (121539217-121539058) | |
| 204-331, gnl|rn3|chr1 (9539020-9538861) | |
| 204-331, gnl|tetNig1|chrUn_random (157214055-157214189) | |
| 204-331, gnl|xenTro1|scaffold_41 (2768863-2768701) | |
| 408-516, gnl|bosTau2|chr9 (45546604-45546496) | |
| 408-516, gnl|Hg17|chr6 (142552256-142552364) | |
| 408-516, gnl|Mm7|chr10 (14378335-14378227) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| cty (0.31224) | |
| cbl (0.229595) | |
| ece (0.229305) | |
| nmm (0.132802) | |
| ecc (0.115035) | |
| eje (0.0988338) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.31224) | |
| cbl (0.229595) | |
| ece (0.229305) | |
| nmm (0.132802) | |
| ecc (0.115035) | |
| eje (0.0988338) |