Non-Coding RNA Search

Ss1.1-recc2833c_k3.5

Sequence:


               
               GGTGATTTAGCTCGAGAAGGACCC------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------TGGATACTAGTCAGGGCAGCTTTATGACGGCTATGATGAAGAGTATGA
CTGTCCTATTTTAGATGAAGATAGAGTTGTTGATGAGTTAGAAAACCAAATGAGTGAAGG
TGGAGTTATGGTTGATTACCATGGTTGTGATTTTTTCCCTGAACGTGGGTTTCATATAGT
TTTGGTGCTGAAAACAGATAACAGGGTTTGGTACAAAAGACTTGAAACAAGGGGTTATAA
CGAGAAGAAACTAAAAGACAATATTCAGTGTGAAATTTTTCAAGTTCTCTATGAAGAAGC
CTTAGCATCCTACAAGGAAGAAATAGTGCATCAGCTACCAAGTGATAAACCAGAAGATCT
GGAGGATAATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGATTTAGCTCGAGAAGGACCC------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------TGGATACTAGTCAGGGCAGCTTTATGACGGCTATGATGAAGAGTATGA
CTGTCCTATTTTAGATGAAGATAGAGTTGTTGATGAGTTAGAAAACCAAATGAGTGAAGG
TGGAGTTATGGTTGATTACCATGGTTGTGATTTTTTCCCTGAACGTGGGTTTCATATAGT
TTTGGTGCTGAAAACAGATAACAGGGTTTGGTACAAAAGACTTGAAACAAGGGGTTATAA
CGAGAAGAAACTAAAAGACAATATTCAGTGTGAAATTTTTCAAGTTCTCTATGAAGAAGC
CTTAGCATCCTACAAGGAAGAAATAGTGCATCAGCTACCAAGTGATAAACCAGAAGATCT
GGAGGATAATAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|50766388|ref|XP_422998.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|50766388|ref|XP_422998.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               39-383, gnl|bosTau2|chr14 (11533036-11533378)
               

               
               39-383, gnl|Hg17|chr8 (6319168-6318824)
               

               
               39-383, gnl|Mm7|chr13 (97769801-97771872)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-383, gnl|bosTau2|chr14 (11533036-11533378)
               

               
               39-383, gnl|Hg17|chr8 (6319168-6318824)
               

               
               39-383, gnl|Mm7|chr13 (97769801-97771872)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	39-383, gnl\|bosTau2\|chr14 (11533036-11533378)
	39-383, gnl\|Hg17\|chr8 (6319168-6318824)
	39-383, gnl\|Mm7\|chr13 (97769801-97771872)