Non-Coding RNA Search

Ss1.1-recc2833c_n18.5

Sequence:


               
               TAGGATTTAATCATAGATGGTTTTTAATCCTTGCAATTGTGATTGTGACCACGAGTGGAG
GACCTTTCATTGCTAAAGCTGATTATGTGTGTAGCCAGAAGAGTACCTTTTTTTTTTTTT
TTTTTTTTTTTTTGTAACCACTGTCTTAATGGCAAAATAATTATGGTAAAGAACCAAGTC
TCGTGTTTATTATTCCTTAAGAACTCTGTGTTATATTACCATGGAACGCCTAATAAAGCA
AAATGTGGTTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGGATTTAATCATAGATGGTTTTTAATCCTTGCAATTGTGATTGTGACCACGAGTGGAG
GACCTTTCATTGCTAAAGCTGATTATGTGTGTAGCCAGAAGAGTACCTTTTTTTTTTTTT
TTTTTTTTTTTTTGTAACCACTGTCTTAATGGCAAAATAATTATGGTAAAGAACCAAGTC
TCGTGTTTATTATTCCTTAAGAACTCTGTGTTATATTACCATGGAACGCCTAATAAAGCA
AAATGTGGTTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-256, gnl|bosTau2|chr8 (39484858-39484602)
               

               
               1-256, gnl|Hg17|chr8 (26571370-26571608)
               

               
               1-256, gnl|Mm7|chr14 (61664010-61663752)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-256, gnl|bosTau2|chr8 (39484858-39484602)
               

               
               1-256, gnl|Hg17|chr8 (26571370-26571608)
               

               
               1-256, gnl|Mm7|chr14 (61664010-61663752)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               ebs (0.591506)
               

               
               ecc (0.345105)
               

               
               fce (0.271592)
               

               
               col (0.195008)
               

               
               fbs (0.175346)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.591506)
               

               
               ecc (0.345105)
               

               
               fce (0.271592)
               

               
               col (0.195008)
               

               
               fbs (0.175346)

	1-256, gnl\|bosTau2\|chr8 (39484858-39484602)
	1-256, gnl\|Hg17\|chr8 (26571370-26571608)
	1-256, gnl\|Mm7\|chr14 (61664010-61663752)

	ebs (0.591506)
	ecc (0.345105)
	fce (0.271592)
	col (0.195008)
	fbs (0.175346)