Ss1.1-rece01c_d9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAGTCCAGCCGCTGGTGCGCGGAGCGGTTTATCGTCTCCGGAGCGGTGCGGCCCAGCCA TTCGCCTAGGCACCCAGGCCCGATGCGCGCGTGCGTGAGCGCGCCTGCGCCCCGGGGCCG CTGCAAGGGGAGGAGAGCCACCGCCTCAGGAGGATCCCTTTCCCCCCAGAAATTACTCAA TGCTGAGACCTTCCAAAGTGACATTGGAGACGTTGGAAGCACCATGGATGGGTTTTATGA TCAACAAGTCCCTTTTATGGTCCCAGGGAAATCTCGATCAGAGGAGTGTAGAGGGCGGCC TGTGATTGACAGAAAGAGGAAGTTTTTGGACACTGATCTGGCTCACGATTCTGAAGAGTT GTTTCAGGATCTCAGTCAACTTCAAGAGGCTTGGTTAGCTGAAGCACAAGTTCCTGATGA TGAACAGTTTGTCCCAGATTTTCAGTCTGATAACTTGGTGCTTCATGCCCCACCTCCAAC CAAGATCAAACGGGAGCTGCACAGCCCCTCCTCTGAGCTGTCGTCCTGTAGCCACGAGCA GGCTCTCGGTGCTAATTATGGAGAAAAGTGCCTCTACAACTATTGTGCCTATGATAGGAA GCCTCCCTCTGGGTTCAAGCCATTAACCCCTCCGACCACCCCTCTGTCGCCCACCCATCA GAATTCCCTATTTCCCCCACCTCAGGCAACTCTGCCCACCTCGGCACATGCCCCTGCAGC TGGCCCAGTACAAGGTGTGGGCCCCACCCCCACCCCTCATTCGCTTCCAGAACCTGGACC ACAGCAGCCAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAGTCCAGCCGCTGGTGCGCGGAGCGGTTTATCGTCTCCGGAGCGGTGCGGCCCAGCCA TTCGCCTAGGCACCCAGGCCCGATGCGCGCGTGCGTGAGCGCGCCTGCGCCCCGGGGCCG CTGCAAGGGGAGGAGAGCCACCGCCTCAGGAGGATCCCTTTCCCCCCAGAAATTACTCAA TGCTGAGACCTTCCAAAGTGACATTGGAGACGTTGGAAGCACCATGGATGGGTTTTATGA TCAACAAGTCCCTTTTATGGTCCCAGGGAAATCTCGATCAGAGGAGTGTAGAGGGCGGCC TGTGATTGACAGAAAGAGGAAGTTTTTGGACACTGATCTGGCTCACGATTCTGAAGAGTT GTTTCAGGATCTCAGTCAACTTCAAGAGGCTTGGTTAGCTGAAGCACAAGTTCCTGATGA TGAACAGTTTGTCCCAGATTTTCAGTCTGATAACTTGGTGCTTCATGCCCCACCTCCAAC CAAGATCAAACGGGAGCTGCACAGCCCCTCCTCTGAGCTGTCGTCCTGTAGCCACGAGCA GGCTCTCGGTGCTAATTATGGAGAAAAGTGCCTCTACAACTATTGTGCCTATGATAGGAA GCCTCCCTCTGGGTTCAAGCCATTAACCCCTCCGACCACCCCTCTGTCGCCCACCCATCA GAATTCCCTATTTCCCCCACCTCAGGCAACTCTGCCCACCTCGGCACATGCCCCTGCAGC TGGCCCAGTACAAGGTGTGGGCCCCACCCCCACCCCTCATTCGCTTCCAGAACCTGGACC ACAGCAGCCAAC |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 1-150, gnl|bosTau2|chr1 (54585757-54585608) | |
| 1-150, gnl|canFam2|chr34 (21797275-21797734) | |
| 1-150, gnl|dasNov1|scaffold_1478 (36214-36653) | |
| 1-150, gnl|echTel1|scaffold_317556 (43309-42873) | |
| 1-150, gnl|galGal2|chr9 (8485470-8484973) | |
| 1-150, gnl|hg17|chr3 (187309245-187309681) | |
| 1-150, gnl|Hg17|chr3 (187309580-187309430) | |
| 1-150, gnl|loxAfr1|scaffold_18973 (1599-2012) | |
| 1-150, gnl|mm7|chr16 (22089352-22089639) | |
| 1-150, gnl|monDom2|scaffold_77 (384270-384816) | |
| 1-150, gnl|oryCun1|scaffold_204075 (105130-104682) | |
| 1-150, gnl|panTro1|chr2 (191351404-191351840) | |
| 1-150, gnl|rheMac2|chr2 (100521886-100521450) | |
| 1-150, gnl|rn3|chr11 (80904034-80903747) | |
| 446-585, gnl|bosTau2|chr1 (54557541-54557401) | |
| 446-585, gnl|canFam2|chr34 (21769320-21769511) | |
| 446-585, gnl|danRer3|chr9 (18331801-18331644) | |
| 446-585, gnl|echTel1|scaffold_310397 (148615-148794) | |
| 446-585, gnl|fr1|chrUn (201892917-201893080) | |
| 446-585, gnl|galGal2|chr9 (8495662-8495478) | |
| 446-585, gnl|hg17|chr3 (187281530-187281721) | |
| 446-585, gnl|Hg17|chr3 (187281677-187281537) | |
| 446-585, gnl|loxAfr1|scaffold_19939 (7129-6940) | |
| 446-585, gnl|mm7|chr16 (22062841-22063019) | |
| 446-585, gnl|Mm7|chr16 (22062988-22062848) | |
| 446-585, gnl|monDom2|scaffold_77 (357372-357559) | |
| 446-585, gnl|oryCun1|scaffold_175430 (359-175) | |
| 446-585, gnl|panTro1|chr2 (191323624-191323815) | |
| 446-585, gnl|rheMac2|chr2 (100549641-100549449) | |
| 446-585, gnl|rn3|chr11 (80930517-80930322) | |
| 446-585, gnl|tetNig1|chr2 (6760553-6760390) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-150, gnl|bosTau2|chr1 (54585757-54585608) | |
| 1-150, gnl|canFam2|chr34 (21797275-21797734) | |
| 1-150, gnl|dasNov1|scaffold_1478 (36214-36653) | |
| 1-150, gnl|echTel1|scaffold_317556 (43309-42873) | |
| 1-150, gnl|galGal2|chr9 (8485470-8484973) | |
| 1-150, gnl|hg17|chr3 (187309245-187309681) | |
| 1-150, gnl|Hg17|chr3 (187309580-187309430) | |
| 1-150, gnl|loxAfr1|scaffold_18973 (1599-2012) | |
| 1-150, gnl|mm7|chr16 (22089352-22089639) | |
| 1-150, gnl|monDom2|scaffold_77 (384270-384816) | |
| 1-150, gnl|oryCun1|scaffold_204075 (105130-104682) | |
| 1-150, gnl|panTro1|chr2 (191351404-191351840) | |
| 1-150, gnl|rheMac2|chr2 (100521886-100521450) | |
| 1-150, gnl|rn3|chr11 (80904034-80903747) | |
| 446-585, gnl|bosTau2|chr1 (54557541-54557401) | |
| 446-585, gnl|canFam2|chr34 (21769320-21769511) | |
| 446-585, gnl|danRer3|chr9 (18331801-18331644) | |
| 446-585, gnl|echTel1|scaffold_310397 (148615-148794) | |
| 446-585, gnl|fr1|chrUn (201892917-201893080) | |
| 446-585, gnl|galGal2|chr9 (8495662-8495478) | |
| 446-585, gnl|hg17|chr3 (187281530-187281721) | |
| 446-585, gnl|Hg17|chr3 (187281677-187281537) | |
| 446-585, gnl|loxAfr1|scaffold_19939 (7129-6940) | |
| 446-585, gnl|mm7|chr16 (22062841-22063019) | |
| 446-585, gnl|Mm7|chr16 (22062988-22062848) | |
| 446-585, gnl|monDom2|scaffold_77 (357372-357559) | |
| 446-585, gnl|oryCun1|scaffold_175430 (359-175) | |
| 446-585, gnl|panTro1|chr2 (191323624-191323815) | |
| 446-585, gnl|rheMac2|chr2 (100549641-100549449) | |
| 446-585, gnl|rn3|chr11 (80930517-80930322) | |
| 446-585, gnl|tetNig1|chr2 (6760553-6760390) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) |