Non-Coding RNA Search

Ss1.1-rece02_o23.5

Sequence:


               
               CGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTCACC
TACAGCATGTGGAAGTTCCCAGGCCTGAAACTGAACCCATTTGGCTTGCAGTGACCCAAG
CTGCTGCAGCGACAATGCCAGATCCTTAACCCACTGTACCATAAGAGTACTCCCCTCAGA
AATTTGAGGGAGCATATCAAAGATACAAAGGTCAGGAGTTCCTGCTGTGGCACAACAGGG
TCGGCAGCATTTCTGCAGAGCCAGGACACAGGTTCGATCCCTAGCCCAGCAATTCCATAT
GCCACAGGGCAGCCAAAAAAGAAAAGAAAAAAGAAGACCCAAAGGTCAGGGCATTACCAG
AGTGGATTCCACTCATGCCATGAACTGCTCTGTCTTTTCAGCCTCCAGCTGGGACGGGCA
TGACCATGATGCCTCAGCAGCCAGTCATGTTTGCACAGCCCATGATGCGGCCACCCTTTG
GAGCTGCAGCTGTACCTGGCGCACAGCTTTCTCCAAGCCCTACACCTGCCACTCAGAGTC
CCAAGAAACCTCCAGCAAAGGACCCATTAGCGGATCTTAACATCAAGGATTTCTTGTAAA
CAATTTAAGCTGCAGTTTTTGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTCACC
TACAGCATGTGGAAGTTCCCAGGCCTGAAACTGAACCCATTTGGCTTGCAGTGACCCAAG
CTGCTGCAGCGACAATGCCAGATCCTTAACCCACTGTACCATAAGAGTACTCCCCTCAGA
AATTTGAGGGAGCATATCAAAGATACAAAGGTCAGGAGTTCCTGCTGTGGCACAACAGGG
TCGGCAGCATTTCTGCAGAGCCAGGACACAGGTTCGATCCCTAGCCCAGCAATTCCATAT
GCCACAGGGCAGCCAAAAAAGAAAAGAAAAAAGAAGACCCAAAGGTCAGGGCATTACCAG
AGTGGATTCCACTCATGCCATGAACTGCTCTGTCTTTTCAGCCTCCAGCTGGGACGGGCA
TGACCATGATGCCTCAGCAGCCAGTCATGTTTGCACAGCCCATGATGCGGCCACCCTTTG
GAGCTGCAGCTGTACCTGGCGCACAGCTTTCTCCAAGCCCTACACCTGCCACTCAGAGTC
CCAAGAAACCTCCAGCAAAGGACCCATTAGCGGATCTTAACATCAAGGATTTCTTGTAAA
CAATTTAAGCTGCAGTTTTTGTGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|3005708|gb|AAC09352.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3005708|gb|AAC09352.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               334-506, gnl|bosTau2|chr9 (10544297-10544124)
               

               
               334-506, gnl|Hg17|chr6 (84326721-84326542)
               

               
               334-506, gnl|Mm7|chr9 (86878273-86878101)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               334-506, gnl|bosTau2|chr9 (10544297-10544124)
               

               
               334-506, gnl|Hg17|chr6 (84326721-84326542)
               

               
               334-506, gnl|Mm7|chr9 (86878273-86878101)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	334-506, gnl\|bosTau2\|chr9 (10544297-10544124)
	334-506, gnl\|Hg17\|chr6 (84326721-84326542)
	334-506, gnl\|Mm7\|chr9 (86878273-86878101)